RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 FBXO17Q96EF6 278 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 NDFIP1Q9BT67 221 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 R4GN57 208 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 AKAP12Q02952 1782 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 HLA-AP01891 365 aaKnown RBP10.06□□□□□ -0.8
CLIP1-203ENST00000361654 TFAP2AP05549 437 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 CT45A10P0DMU9 189 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 PRKACAP17612 351 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 SLC19A1P41440 591 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 CCL7P80098 99 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 HSF1Q00613 529 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 SNTB1Q13884 538 aaKnown RBP10.06□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF74Q16587 644 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 LAIR1Q6GTX8 287 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 GABRG1Q8N1C3 465 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 PNPLA1Q8N8W4 532 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 BEST4Q8NFU0 473 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 SMIM3Q9BZL3 60 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 GPATCH2Q9NW75 528 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 LRP6O75581 1613 aa10.06□□□□□ -0.8
CLIP1-203ENST00000361654 TRGV5A0A0B4J1U4 118 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ANKRD61A6NGH8 418 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 M0R296 226 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 CDK1P06493 297 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ITGAMP11215 1152 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 PRAMEF5Q5TYX0 476 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 PRAMEF6Q5VXH4 476 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF534Q76KX8 674 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 TMEM200AQ86VY9 491 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 SLAMF9Q96A28 289 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 TNFRSF10AO00220 468 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ZGLP1P0C6A0 271 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 HLA-DOBP13765 273 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 MAKP20794 623 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 PPT1P50897 306 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 NCS1P62166 190 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 MEP1BQ16820 701 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF628Q5EBL2 1059 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF836Q6ZNA1 936 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 DCXRQ7Z4W1 244 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 DPPA2Q7Z7J5 298 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 PHYHIPQ92561 330 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 GTF2H4Q92759 462 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 TMEM106AQ96A25 262 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 KCTD12Q96CX2 325 aaKnown RBP10.05□□□□□ -0.8
CLIP1-203ENST00000361654 TECTBQ96PL2 329 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 FAM173AQ9BQD7 235 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ERVMER34-1Q9H9K5 563 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ACOT8O14734 319 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 HRO43593 1189 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 NR4A2P43354 598 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 RAB35Q15286 201 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 SLC9A3R2Q15599 337 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 GLYR1Q49A26 553 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-203ENST00000361654 FCRLAQ7L513 359 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 LAT2Q9GZY6 243 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 MOB1AQ9H8S9 216 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 COPS3Q9UNS2 423 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 C19orf53Q9UNZ5 99 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-203ENST00000361654 IGLV3-10A0A075B6K4 115 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 I6L893 689 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-203ENST00000361654 K7EPK0 472 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 PTTG1O95997 202 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 NAGAP17050 411 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 CR2P20023 1033 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 LRRC10Q5BKY1 277 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF766Q5HY98 468 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ASTLQ6HA08 431 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ELP2Q6IA86 826 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 KANSL1Q7Z3B3 1105 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 RTN4RL1Q86UN2 441 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-203ENST00000361654 FAM71E2Q8N5Q1 922 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 OR4F15Q8NGB8 312 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 OR5M1Q8NGP8 315 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 FGGYQ96C11 551 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 MRGPRX4Q96LA9 322 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF75AQ96N20 296 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 SAMD10Q9BYL1 202 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 OR51E2Q9H255 320 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 SLCO5A1Q9H2Y9 848 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 NRIP3Q9NQ35 241 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 RAB22AQ9UL26 194 aa10.05□□□□□ -0.8
CLIP1-203ENST00000361654 AGAP14A8MT82 685 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 TNFSF14O43557 240 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 TRAF3IP2O43734 574 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 NPPBP16860 134 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 HNF1AP20823 631 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 GCAP28676 217 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 NKX6-1P78426 367 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 TLE4Q04727 773 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 NFATC3Q12968 1075 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 SSX2Q16385 188 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF740Q8NDX6 193 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 OR6M1Q8NGM8 313 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 TTC9Q92623 222 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 MRPS24Q96EL2 167 aaKnown RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ELMOD3Q96FG2 381 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 PPIL3Q9H2H8 161 aaKnown RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 CACFD1Q9UGQ2 172 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms