RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 LGALS3BPQ08380 585 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 PTGES3Q15185 160 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 TRIP10Q15642 601 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 LEG1Q6P5S2 330 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 PTCHD4Q6ZW05 846 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 NPEPL1Q8NDH3 523 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 OR4K13Q8NH42 304 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC38A2Q96QD8 506 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 DDOQ99489 341 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 WACQ9BTA9 647 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 RACGAP1Q9H0H5 632 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 ZNF226Q9NYT6 803 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 KCNN3Q9UGI6 736 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 AMDHD2Q9Y303 409 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 FKBP7Q9Y680 259 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 HCFC1P51610 2035 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 ZAR1LA6NP61 321 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 MITFO75030 526 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 KHDRBS3O75525 346 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 RAD51DO75771 328 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 FARS2O95363 451 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 WNT11O96014 354 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 OR8G3PP0DMU2 310 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 EPXP11678 715 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 PAICSP22234 425 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC25A1P53007 311 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 MRPS34P82930 218 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 ARF1P84077 181 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 ZNF362Q5T0B9 420 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 OGFRL1Q5TC84 451 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 ANKRD34AQ69YU3 496 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 SP5Q6BEB4 398 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 ACSM5Q6NUN0 579 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 FOXL2NBQ6ZUU3 175 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 ZBTB46Q86UZ6 589 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 FAM169BQ8N8A8 192 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 OR52E2Q8NGJ4 325 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 OR4Q3Q8NH05 313 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 BCL2L2Q92843 193 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 S100PBPQ96BU1 408 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 ZNF837Q96EG3 531 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 NMNAT3Q96T66 252 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 MED18Q9BUE0 208 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 SYT4Q9H2B2 425 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 VCXQ9H320 206 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 FN3KQ9H479 309 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 SIAEQ9HAT2 523 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 NGBQ9NPG2 151 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 TMEM38BQ9NVV0 291 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 PLEKHB1Q9UF11 243 aaPredicted RBP12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 PTPN13Q12923 2485 aa12.13□□□□□ -0.47
NSMCE1-201ENST00000361439 ICE1Q9Y2F5 2266 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 DOPEY2Q9Y3R5 2298 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 SH3D21A4FU49 640 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 OR6C68A6NDL8 312 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 SURF4O15260 269 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC2A10O95528 541 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 PTDSS1P48651 473 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 BLVRAP53004 296 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 FOXG1P55316 489 aaPredicted RBP12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 UBE2NP61088 152 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 GLO1Q04760 184 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 C3orf36Q3SXR2 165 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 TBRG1Q3YBR2 411 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 SLX4IPQ5VYV7 408 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 MEX3BQ6ZN04 569 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 ZNF813Q6ZN06 617 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 GLB1L2Q8IW92 636 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 SDR9C7Q8NEX9 313 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 OR2T4Q8NH00 348 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 NANOS1Q8WY41 292 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 PLEKHA8Q96JA3 519 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 WFIKKN1Q96NZ8 548 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC29A1Q99808 456 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 GRIP2Q9C0E4 1043 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 NUAK2Q9H093 628 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 NELFAQ9H3P2 528 aa12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 RRP15Q9Y3B9 282 aaKnown RBP12.12□□□□□ -0.47
NSMCE1-201ENST00000361439 A1L4Q6 167 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 E9PQ18 207 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 H7C1C5 153 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 CASKO14936 926 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC16A7O60669 478 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 COX6B1P14854 86 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 CTLA4P16410 223 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 LAP3P28838 519 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 CDC42P60953 191 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 LCN6P62502 163 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 FMODQ06828 376 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 DAZAP2Q15038 168 aaPredicted RBP12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 PPA1Q15181 289 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 TAB1Q15750 504 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 SNAPC1Q16533 368 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms