RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 NKX2-1P43699 371 aaPredicted RBP8.61□□□□□ -1.03
VPS13A-203ENST00000360280 LTC4SQ16873 150 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 MOGAT2Q3SYC2 334 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF534Q76KX8 674 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 BOD1Q96IK1 185 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 NKX2-4Q9H2Z4 354 aa8.61□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF593O00488 134 aaPredicted RBP8.6□□□□□ -1.03
VPS13A-203ENST00000360280 GALR3O60755 368 aaPredicted RBP8.6□□□□□ -1.03
VPS13A-203ENST00000360280 RD3LP0DJH9 198 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 ABOP16442 354 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 IFI44Q8TCB0 444 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 SEH1LQ96EE3 360 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 MBOAT4Q96T53 435 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 PLEKHA2Q9HB19 425 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 TBC1D28Q2M2D7 210 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 NCR3LG1Q68D85 454 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 TMEM182Q6ZP80 229 aaPredicted RBP8.6□□□□□ -1.03
VPS13A-203ENST00000360280 DPPA4Q7L190 304 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 DUSP23Q9BVJ7 150 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 ESRP2Q9H6T0 727 aaKnown RBP8.6□□□□□ -1.03
VPS13A-203ENST00000360280 PDCD11Q14690 1871 aaKnown RBP8.6□□□□□ -1.03
VPS13A-203ENST00000360280 PAPLNO95428 1278 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 SEMA4FO95754 770 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 MARCH8Q5T0T0 291 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF595Q8IYB9 648 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 C11orf49Q9H6J7 331 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 ACOXLQ9NUZ1 547 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 PIK3C2AO00443 1686 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 CORO6Q6QEF8 472 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 SPOCK3Q9BQ16 436 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 ACOD1A6NK06 481 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 RAF1P04049 648 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 HTR1FP30939 366 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 LMNTD1Q8N9Z9 388 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 OR6M1Q8NGM8 313 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 NEIL2Q969S2 332 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 CIB3Q96Q77 187 aaPredicted RBP8.6□□□□□ -1.03
VPS13A-203ENST00000360280 FAM24AA6NFZ4 105 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 CTDSP2O14595 271 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 FBP1P09467 338 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 FGF7P21781 194 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 PHLDA2Q53GA4 152 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 GLYATL3Q5SZD4 288 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 PPP1R3BQ86XI6 285 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 LYSMD2Q8IV50 215 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 C12orf42Q96LP6 360 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 NSG2Q9Y328 171 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 TRDV1A0A1B0GX56 115 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 TRABD2BA6NFA1 517 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 IGHEP01854 428 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 P2RX3P56373 397 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 MFAP5Q13361 173 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 EMG1Q92979 244 aaKnown RBP8.6□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF816-ZNF321PA0A0X1KG74 233 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 PHOX2AO14813 284 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 LDB3O75112 727 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 HSBP1O75506 76 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 CD46P15529 392 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 SDC1P18827 310 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 SLC35D3Q5M8T2 416 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 KIR2DS5A0A0G2JLQ3 304 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 A0A0G2JNG1 304 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 KIR2DS3K7RE56 304 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 ARNTLO00327 626 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 MPGP29372 298 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 NPY4RP50391 375 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 KIR2DS5Q14953 304 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 CBLL1Q75N03 491 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 FIBINQ8TAL6 211 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 SOWAHBA6NEL2 793 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 KIAA1324LA8MWY0 1029 aaPredicted RBP8.6□□□□□ -1.03
VPS13A-203ENST00000360280 HYAL4Q2M3T9 481 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 TRIM61Q5EBN2 209 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 FRMPD2BQ6IN97 320 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 CLRN3Q8NCR9 226 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 OR13F1Q8NGS4 319 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 DDOQ99489 341 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 TRBV4-1A0A0J9YWV2 114 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 KIR2DL3P43628 341 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 INHBCP55103 352 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 FCN2Q15485 313 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 COMMD1Q8N668 190 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 CELF2-AS1Q8N7Q2 184 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 RASD2Q96D21 266 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 A0A1W2PPQ1 181 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 CALCBP10092 127 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 NTSR1P30989 418 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 PXDC1Q5TGL8 231 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 AGBL4Q5VU57 503 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 GRAMD2AQ8IUY3 354 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 C11orf42Q8N5U0 333 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 S1PR3Q99500 378 aa8.6□□□□□ -1.03
VPS13A-203ENST00000360280 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
VPS13A-203ENST00000360280 OR2M3Q8NG83 312 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 PLRG1O43660 514 aaKnown RBP8.59□□□□□ -1.03
VPS13A-203ENST00000360280 WNT11O96014 354 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 UCN3Q969E3 161 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 TUBGCP6Q96RT7 1819 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 GPX3P22352 226 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms