RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 TRAM1Q15629 374 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 INPP5JQ15735 1006 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ALG11Q2TAA5 492 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 KRBOX4Q5JUW0 171 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 TANGO2Q6ICL3 276 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 LIN54Q6MZP7 749 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ADAM5Q6NVV9 412 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 C11orf88Q6PI97 169 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 AGTRAPQ6RW13 159 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 LINGO2Q7L985 606 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 C6orf120Q7Z4R8 191 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 LRRTM1Q86UE6 522 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 WDR5BQ86VZ2 330 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 THOC6Q86W42 341 aaKnown RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 MUC20Q8N307 709 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 SPEM1Q8N4L4 309 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 KCNRGQ8N5I3 272 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 UBAC2Q8NBM4 344 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 OR5D16Q8NGK9 328 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 OR9A2Q8NGT5 310 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 OR2G2Q8NGZ5 317 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 OR52I2Q8NH67 350 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ARL11Q969Q4 196 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 C3orf49Q96BT1 292 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 EID2BQ96D98 161 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 MVB12AQ96EY5 273 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 OR2M4Q96R27 311 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 NRIP2Q9BQI9 281 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 MESP1Q9BRJ9 268 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 UTP23Q9BRU9 249 aaKnown RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ZNF649Q9BS31 505 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ATG101Q9BSB4 218 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 APOOQ9BUR5 198 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 SLC17A9Q9BYT1 436 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 OPN3Q9H1Y3 402 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 TMEM38AQ9H6F2 299 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 C7orf69Q9H7B7 122 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ISG20L2Q9H9L3 353 aaKnown RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 LYRM4Q9HD34 91 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 LHX9Q9NQ69 397 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 MEPEQ9NQ76 525 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 DNAJB12Q9NXW2 375 aaKnown RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 GAR1Q9NY12 217 aaKnown RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 VPS29Q9UBQ0 182 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 CCL26Q9Y258 94 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 FAM96BQ9Y3D0 163 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 MMACHCQ9Y4U1 282 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 SIRT4Q9Y6E7 314 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 SPACA6W5XKT8 324 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 VPS13AQ96RL7 3174 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 TMEM272A0A1B0GTI8 110 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 hCG_1809904A0A1W2PP81 198 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 A0A1W2PR64 198 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 A0A1W2PRV1 198 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 J3QKU1 62 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 SYT5O00445 386 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 FAAHO00519 579 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 FGF16O43320 207 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 EMC8O43402 210 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 BCL2L11O43521 198 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 PCDH8O95206 1070 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ONECUT2O95948 504 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 PMP2P02689 132 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ATP1B1P05026 303 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 EPHX1P07099 455 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 CD79AP11912 226 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 RNH1P13489 461 aaKnown RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 HOXB2P14652 356 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 CRABP1P29762 137 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 PDHA2P29803 388 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 AGTR1P30556 359 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 MNDAP41218 407 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 GPR3P46089 330 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 CDX1P47902 265 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 SLC6A11P48066 632 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 AP3S2P59780 193 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 CDK6Q00534 326 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 CDK5Q00535 292 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 B4GALNT1Q00973 533 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 FOXO1Q12778 655 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 TOMM20Q15388 145 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 RSU1Q15404 277 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ELAVL1Q15717 326 aaKnown RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ZIC1Q15915 447 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ZNF630Q2M218 657 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 AARDQ4LEZ3 155 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 AADACL4Q5VUY2 407 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 PAPD4Q6PIY7 484 aaKnown RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 POMZP3Q6PJE2 187 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ZNF322Q6U7Q0 402 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 LINGO4Q6UY18 593 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 NPSR1Q6W5P4 371 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 TMPRSS11FQ6ZWK6 438 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ABHD13Q7L211 337 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 SLC36A1Q7Z2H8 476 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 NUP54Q7Z3B4 507 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 CEACAM19Q7Z692 300 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.63□□□□□ -1.83
CNGA1-201ENST00000358519 TMPRSS11BQ86T26 416 aa3.63□□□□□ -1.83
CNGA1-201ENST00000358519 GKN2Q86XP6 184 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms