RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GABRB1P18505 474 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ACHEP22303 614 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ARG2P78540 354 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 LIPNQ5VXI9 398 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 FAM199XQ6PEV8 388 aaPredicted RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 ZNF705AQ6ZN79 300 aaPredicted RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 OR51A4Q8NGJ6 313 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ARV1Q9H2C2 271 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ATP13A2Q9NQ11 1180 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 CHST2Q9Y4C5 530 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 PCDHGA5Q9Y5G8 931 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 PHLPP1O60346 1717 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 A0A0A6YYJ9 748 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 APEHP13798 732 aaKnown RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 BDH1Q02338 343 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 SNTB1Q13884 538 aaKnown RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 ADIRFQ15847 76 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 DCXRQ7Z4W1 244 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 TMEM99Q8N816 258 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ELF4Q99607 663 aaPredicted RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 EVX1P49640 407 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ZNF620Q6ZNG0 422 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 C15orf54Q8N8G6 183 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 LRFN5Q96NI6 719 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 CMC2Q9NRP2 79 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 KCNIP2Q9NS61 270 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ACOXLQ9NUZ1 547 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 TAS2R5Q9NYW4 299 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 CCSO14618 274 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 B4GALT3O60512 393 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 PRAMEF4O60810 478 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 THBS1P07996 1170 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 CLDN20P56880 219 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 TESK1Q15569 626 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ACOT7LQ6ZUV0 252 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 FJX1Q86VR8 437 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 NAXDQ8IW45 347 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 NAT6Q93015 286 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 HHIPQ96QV1 700 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 CXCL16Q9H2A7 254 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ZCCHC4Q9H5U6 513 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 HINT3Q9NQE9 182 aaKnown RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 DNMT3BQ9UBC3 853 aaKnown RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 GHRLQ9UBU3 117 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 CGGBP1Q9UFW8 167 aaPredicted RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 GPR160Q9UJ42 338 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 HMGN4O00479 90 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 EIF1BO60739 113 aaKnown RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 NID1P14543 1247 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 CST5P28325 142 aaPredicted RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 GABRA2P47869 451 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 GRB2P62993 217 aaKnown RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 ADIPOR2Q86V24 386 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 B3GALT5Q9Y2C3 310 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 MRPS21P82921 87 aaKnown RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 AKR1C1Q04828 323 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 OR2L13Q8N349 312 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 GNG12Q9UBI6 72 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 LHX6Q9UPM6 363 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 URB1O60287 2271 aaKnown RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 LRP5LA4QPB2 252 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 FITM1A5D6W6 292 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 MAGEB4O15481 346 aaPredicted RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 OR13C7P0DN81 318 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 FCRL6Q6DN72 434 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 PAQR6Q6TCH4 344 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 NAA40Q86UY6 237 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 OR4A16Q8NH70 328 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 SOD1P00441 154 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 S100A7P31151 101 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 GZMKP49863 264 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 RAB11AP62491 216 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 TMEM52BQ4KMG9 183 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 C9orf135Q5VTT2 229 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 OR2G3Q8NGZ4 309 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 SEH1LQ96EE3 360 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 KIRREL1Q96J84 757 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 ZNF75AQ96N20 296 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 LYRM4Q9HD34 91 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 GFYI3L273 518 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 TUSC2O75896 110 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 EIF1P41567 113 aaKnown RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 YOD1Q5VVQ6 348 aaPredicted RBP13.64□□□□□ -0.23
CHD4-201ENST00000357008 SKA3Q8IX90 412 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 C1orf87Q8N0U7 546 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 OR13C8Q8NGS7 320 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 OR6K3Q8NGY3 331 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 HCSTQ9UBK5 93 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 HRH3Q9Y5N1 445 aa13.64□□□□□ -0.23
CHD4-201ENST00000357008 HSPB6O14558 160 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 ST8SIA3O43173 380 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 CSF3P09919 207 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 ZDHHC11BP0C7U3 371 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 ICAM2P13598 275 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 DUSP5Q16690 384 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 RHOUQ7L0Q8 258 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 SFT2D1Q8WV19 159 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 BSCL2Q96G97 398 aaPredicted RBP13.63□□□□□ -0.23
CHD4-201ENST00000357008 OPALINQ96PE5 141 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms