RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 STAC2Q6ZMT1 411 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TUBA1AQ71U36 451 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 C20orf196Q8IYI0 205 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ADPRHL1Q8NDY3 354 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 CNIH3Q8TBE1 160 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 RND1Q92730 232 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SF3B5Q9BWJ5 86 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 C1QTNF6Q9BXI9 259 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 NMNAT2Q9BZQ4 307 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 WDR76Q9H967 626 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 NPDC1Q9NQX5 325 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 TBC1D23Q9NUY8 699 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SMPD3Q9NY59 655 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 KLHL9Q9P2J3 617 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 GRHPRQ9UBQ7 328 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TMEM5Q9Y2B1 443 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 NOX1Q9Y5S8 564 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 HCFC1P51610 2035 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 CUBNO60494 3623 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TVP23AA6NH52 213 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 FAM90A27PA6NNH2 459 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SLC16A7O60669 478 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 CTSSP25774 331 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 OR3A2P47893 321 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.54□□□□□ -1.84
LIG4-201ENST00000356922 RNPS1Q15287 305 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 SLX4IPQ5VYV7 408 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SLC27A4Q6P1M0 643 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 LEG1Q6P5S2 330 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 USP51Q70EK9 711 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SHFQ7M4L6 423 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 MRGPRGQ86SM5 289 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SLC43A2Q8N370 569 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ANKK1Q8NFD2 765 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 OR2T33Q8NG76 320 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 OR52L1Q8NGH7 329 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 OR6X1Q8NH79 312 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 CYGBQ8WWM9 190 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 KISS1RQ969F8 398 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 TMEM54Q969K7 222 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 NABP1Q96AH0 204 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 LRRC46Q96FV0 321 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SEC61A2Q9H9S3 476 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 CMC2Q9NRP2 79 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 MRPL22Q9NWU5 206 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 PAQR5Q9NXK6 330 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 GLTPQ9NZD2 209 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 POFUT2Q9Y2G5 429 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 COA3Q9Y2R0 106 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 CCDC168Q8NDH2 2452 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 IGLV1-36A0A0B4J1U3 117 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 XKRYO14609 159 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SLC16A6O15403 523 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 ENTPD6O75354 484 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 VAMP5O95183 116 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 IGHMP01871 453 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 HOXC12P31275 282 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 ATP6V1E1P36543 226 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 NUDT6P53370 316 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 ESRRGP62508 458 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 PIGFQ07326 219 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CD47Q08722 323 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 KRR1Q13601 381 aaKnown RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 MFSD13AQ14CX5 517 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 PDK3Q15120 406 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CEACAM16Q2WEN9 425 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 C4orf17Q53FE4 359 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 AADACL4Q5VUY2 407 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CORO6Q6QEF8 472 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SEZ6L2Q6UXD5 910 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CXorf67Q86X51 503 aaPredicted RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 OR6N1Q8NGY5 312 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 RHOXF1Q8NHV9 184 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 ZNF566Q969W8 418 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 AMELYQ99218 206 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 TM9SF2Q99805 663 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 ADI1Q9BV57 179 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 RBM24Q9BX46 236 aaKnown RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 GPR35Q9HC97 309 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 DNAJC27Q9NZQ0 273 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 UPB1Q9UBR1 384 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 ZNF629Q9UEG4 869 aaPredicted RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 B9D1Q9UPM9 204 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 A0A1W2PRG6 482 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 C5orf63A6NC05 138 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SIAH2O43255 324 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 CLDN1O95832 211 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 HLA-DQA2P01906 255 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 B4GALT1P15291 398 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 HOXB6P17509 224 aaKnown RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 GSTM3P21266 225 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SLC2A5P22732 501 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 SLC6A6P31641 620 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 GGT2P36268 569 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 RANBP1P43487 201 aa3.53□□□□□ -1.84
LIG4-201ENST00000356922 RPS7P62081 194 aaKnown RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 ARF1P84077 181 aaKnown RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 ROR2Q01974 943 aaKnown RBP3.53□□□□□ -1.84
LIG4-201ENST00000356922 SNAPC1Q16533 368 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms