RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TFECO14948 347 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SURF4O15260 269 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 NOL3O60936 208 aaKnown RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 NPIPB7O75200 414 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PTP4A3O75365 173 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 NDUFB2O95178 105 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SNX4O95219 450 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 NTN1O95631 604 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 CDK1P06493 297 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 HTR1AP08908 422 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SAGP10523 405 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PEPDP12955 493 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 IFI30P13284 250 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 ATP6V1B1P15313 513 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF17P17021 662 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF3P17036 446 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PCMT1P22061 227 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PAICSP22234 425 aaKnown RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 ACVR2AP27037 513 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 DCKP27707 260 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PEX19P40855 299 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 APOBEC1P41238 236 aaKnown RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 KIR2DL3P43628 341 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 CENPAP49450 140 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SSR4P51571 173 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 GAS1P54826 345 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 HOXC5Q00444 222 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 OC90Q02509 493 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PMPCAQ10713 525 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 IRF3Q14653 427 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF74Q16587 644 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 KLHL22Q53GT1 634 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SYT14P1Q58G82 188 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SYT6Q5T7P8 510 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SHEQ5VZ18 495 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 XAF1Q6GPH4 301 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 DPY19L2P2Q6ZN68 376 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 KCTD8Q6ZWB6 473 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF367Q7RTV3 350 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 HMGN2P46Q86SG4 172 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 OAFQ86UD1 273 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 KIF18BQ86Y91 864 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PHC2Q8IXK0 858 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 CADM2Q8N3J6 435 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 TMCO5AQ8N6Q1 288 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SCAIQ8N9R8 606 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 ADPRHL1Q8NDY3 354 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 BPIFB6Q8NFQ5 453 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 DOK4Q8TEW6 326 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PAQR8Q8TEZ7 354 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SLC25A43Q8WUT9 341 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 RORBQ92753 470 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PLEKHA8Q96JA3 519 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 OR14A2Q96R54 314 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SNX18Q96RF0 628 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 RASL10BQ96S79 203 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 GPA33Q99795 319 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 OR52D1Q9H346 318 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 UBQLN3Q9H347 655 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SH2D2AQ9NP31 389 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 FANCFQ9NPI8 374 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 SACM1LQ9NTJ5 587 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 HAO2Q9NYQ3 351 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PTTG2Q9NZH5 202 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 WARS2Q9UGM6 360 aaKnown RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 PFDN2Q9UHV9 154 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 KLHL21Q9UJP4 597 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 DIMT1Q9UNQ2 313 aaKnown RBP6.2□□□□□ -1.42
VPS13A-201ENST00000355766 CARD8Q9Y2G2 431 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 COMMD3-BMI1R4GMX3 469 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 HCFC1P51610 2035 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 HEATR5AQ86XA9 2040 aa6.2□□□□□ -1.42
VPS13A-201ENST00000355766 IGKV1D-42A0A075B6H8 117 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 TRAV36DV7A0A075B6V5 113 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ARPC4-TTLL3A0A0A6YYG9 625 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 IGHV3-20A0A0C4DH32 117 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 TMEM129A0AVI4 362 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 RNF212BA8MTL3 300 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 H7C1Q1 480 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ITGA10O75578 1167 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 OR2J2O76002 312 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 OR7A10O76100 309 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 SOX14O95416 240 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 FADS2O95864 444 aaKnown RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 TXNDC12O95881 172 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ASAH2BP0C7U1 165 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 DBTP11182 482 aaKnown RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 MAKP20794 623 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 POU1F1P28069 291 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 HTR1FP30939 366 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 FMO3P31513 532 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 GPR4P46093 362 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 CCR4P51679 360 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF41P51814 821 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 MLF1P58340 268 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 NKX6-1P78426 367 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 DGCR2P98153 550 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF91Q05481 1191 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms