RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 POFUT1Q9H488 388 aa13.16□□□□□ -0.3
GFRA1-201ENST00000355422 KCNG2Q9UJ96 466 aa13.16□□□□□ -0.3
GFRA1-201ENST00000355422 CLDN16Q9Y5I7 305 aa13.16□□□□□ -0.3
GFRA1-201ENST00000355422 TOR1AO14656 332 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 TNFRSF10CO14798 259 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 GMFGO60234 142 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 KLF8O95600 359 aaPredicted RBP13.15□□□□□ -0.3
GFRA1-201ENST00000355422 TXNDC12O95881 172 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 HNRNPA2B1P22626 353 aaKnown RBP13.15□□□□□ -0.3
GFRA1-201ENST00000355422 MST1P26927 711 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 MPGP29372 298 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 ARHGAP40Q5TG30 622 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 MED25Q71SY5 747 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 PM20D2Q8IYS1 436 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 AVL9Q8NBF6 648 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 CLEC1AQ8NC01 280 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 OR6K3Q8NGY3 331 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 SLC37A2Q8TED4 501 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 PMEPA1Q969W9 287 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 ATG5Q9H1Y0 275 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 IGFLR1Q9H665 355 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 MPDZO75970 2070 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 D6RAR5 112 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 AQP8O94778 261 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 WNT11O96014 354 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 HPP00738 406 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 HPGDP15428 266 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 MPPED2Q15777 294 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 RAB11BQ15907 218 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 OOSP2Q86WS3 158 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 ZNF440Q8IYI8 595 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 PLPP7Q8NBV4 271 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 LDAHQ9H6V9 325 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 GLS2Q9UI32 602 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 ZNF230Q9UIE0 474 aaPredicted RBP13.15□□□□□ -0.3
GFRA1-201ENST00000355422 GTF2A1LQ9UNN4 478 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 SLC22A13Q9Y226 551 aa13.15□□□□□ -0.3
GFRA1-201ENST00000355422 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 SRPX2O60687 465 aaPredicted RBP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 RENP00797 406 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 RPA2P15927 270 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 EEF1A1P5Q5VTE0 462 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 ATRAIDQ6UW56 229 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 SLC35D2Q76EJ3 337 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 PARGQ86W56 976 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 IQCF2Q8IXL9 164 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 GABRG1Q8N1C3 465 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 MRPS24Q96EL2 167 aaKnown RBP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 GAS2L1Q99501 681 aaPredicted RBP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 ELOVL3Q9HB03 270 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 COL4A2P08572 1712 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 RFPL4AA6NLU0 287 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 RFPL4AL1F8VTS6 287 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 SIGLEC5O15389 551 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 ACHEP22303 614 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 SIGLEC14Q08ET2 396 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 FUT7Q11130 342 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 SKP2Q13309 424 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 MEP1BQ16820 701 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 FNDC7Q5VTL7 733 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 ASPHD2Q6ICH7 369 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 Q6ZSR6 202 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 TMED4Q7Z7H5 227 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 MCATQ8IVS2 390 aaKnown RBP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 METTL27Q8N6F8 245 aaPredicted RBP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 ZNF615Q8N8J6 731 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 ZSCAN1Q8NBB4 408 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 GPX8Q8TED1 209 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
GFRA1-201ENST00000355422 TMEM14AQ9Y6G1 99 aa13.14□□□□□ -0.31
GFRA1-201ENST00000355422 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 LOC100289279A0A1B0GTE1 492 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 M0QYG6 137 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 SLC17A2O00624 439 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 SMAD9O15198 467 aaKnown RBP13.13□□□□□ -0.31
GFRA1-201ENST00000355422 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 APOC3P02656 99 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 ITGB2P05107 769 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 CA3P07451 260 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 OR4E1P0C645 316 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 IGLV3-21P80748 117 aaPredicted RBP13.13□□□□□ -0.31
GFRA1-201ENST00000355422 EIF2B5Q13144 721 aaKnown RBP13.13□□□□□ -0.31
GFRA1-201ENST00000355422 EMC4Q5J8M3 183 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 LY6G6FQ5SQ64 297 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 OTOSQ8NHW6 89 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 ZNF563Q8TA94 476 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 HERVK_113Q902F9 699 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 CCNL2Q96S94 520 aaPredicted RBP13.13□□□□□ -0.31
GFRA1-201ENST00000355422 PBX4Q9BYU1 374 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 YBX2Q9Y2T7 364 aaKnown RBP13.13□□□□□ -0.31
GFRA1-201ENST00000355422 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
GFRA1-201ENST00000355422 FAM221BA6H8Z2 402 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 PNPP00491 289 aa13.13□□□□□ -0.31
GFRA1-201ENST00000355422 ICAM2P13598 275 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms