RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ZBP1Q9H171 429 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NHEJ1Q9H9Q4 299 aaPredicted RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 MYOZ2Q9NPC6 264 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SPATA2Q9UM82 520 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 CDH10Q9Y6N8 788 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 DUOX2Q9NRD8 1548 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 TONSLQ96HA7 1378 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 FANCIQ9NVI1 1328 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 BDP1A6H8Y1 2624 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 HSPG2P98160 4391 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 IGKV1D-13A0A0B4J2D9 117 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 A0A1B0GUH1 482 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 OR5B21A6NL26 309 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 F6UB75 175 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 K7EMT4 169 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 K7EN84 100 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 K7ENP7 123 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF701M0R085 212 aaPredicted RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SPOPO43791 374 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NMT2O60551 498 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF432O94892 652 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NUDT14O95848 222 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SERPINA5P05154 406 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 KRT16P08779 473 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 IGKV1-13P0DP09 117 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 COX5AP20674 150 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 IGFBP5P24593 272 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SHMT2P34897 504 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 CRYBB2P43320 205 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RPL29P47914 159 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RAB7AP51149 207 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ERVK-16P61578 105 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RND3P61587 244 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RUNX3Q13761 415 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 CCDC6Q16204 474 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 C22orf42Q6IC83 251 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 LINC00523Q86TU6 105 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 APOBEC3FQ8IUX4 373 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NUDCD3Q8IVD9 361 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 LSMEM2Q8N112 164 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 MRGPRDQ8TDS7 321 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 BAALCQ8WXS3 180 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 CHCHD10Q8WYQ3 142 aaPredicted RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 OR1E3Q8WZA6 343 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RASL10AQ92737 203 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 CCDC126Q96EE4 140 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 OR8B4Q96RC9 309 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 FRMD8P1Q9BZ68 369 aaPredicted RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 PPDPFQ9H3Y8 114 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 GNB4Q9HAV0 340 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 POLD4Q9HCU8 107 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ABCC13Q9NSE7 274 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 STOX2Q9P2F5 926 aaPredicted RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 PEF1Q9UBV8 284 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RSPH14Q9UHP6 348 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF229Q9UJW7 825 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RARRES3Q9UL19 164 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 DDX19BQ9UMR2 479 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NOTCH4Q99466 2003 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 MYOM2P54296 1465 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 TEP1Q99973 2627 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 TRANK1O15050 2925 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 A0A1B0GWB2 263 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 A0A1W2PNV4 684 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 LRRIQ3A6PVS8 624 aaPredicted RBP1.28□□□□□ -2.21
BRCA1-202ENST00000354071 NR5A2O00482 541 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 SOCS3O14543 225 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 LGALS2P05162 132 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 LMO2P25791 158 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 APOC4P55056 127 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 MRPS11P82912 194 aaKnown RBP1.28□□□□□ -2.21
BRCA1-202ENST00000354071 PAX2Q02962 417 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 BCL2L1Q07817 233 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 GLYR1Q49A26 553 aaPredicted RBP1.28□□□□□ -2.21
BRCA1-202ENST00000354071 GPR107Q5VW38 600 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 SPECC1LQ69YQ0 1117 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 SCD5Q86SK9 330 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 PRELID2Q8N945 189 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 MNS1Q8NEH6 495 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 FANK1Q8TC84 345 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 GTSF1Q8WW33 167 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 ATP6V1G3Q96LB4 118 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 KIR2DL4Q99706 377 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 GBA3Q9H227 469 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 SPACA1Q9HBV2 294 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 SH2D2AQ9NP31 389 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 MRPS30Q9NP92 439 aaKnown RBP1.28□□□□□ -2.21
BRCA1-202ENST00000354071 ADAP2Q9NPF8 381 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 SLC17A7Q9P2U7 560 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 ENPP5Q9UJA9 477 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 SLC17A4Q9Y2C5 497 aa1.28□□□□□ -2.21
BRCA1-202ENST00000354071 FRMPD3Q5JV73 1810 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 AK9Q5TCS8 1911 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 IGKV2D-30A0A075B6S6 120 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GOLGA6L10A6NI86 522 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 E9PAM4 449 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GOLGA6L19H0YKK7 550 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 SMLR1H3BR10 107 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 PSMD11O00231 422 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms