RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PGGHGQ32M88 737 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 C9orf64Q5T6V5 341 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 PIP5KL1Q5T9C9 394 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 ARMC6Q6NXE6 501 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 TAS1R1Q7RTX1 841 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 SLC35F3Q8IY50 421 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 TEX19Q8NA77 164 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 OR1J1Q8NGS3 322 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 EID2BQ96D98 161 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 MYADMQ96S97 322 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 NKX3-1Q99801 234 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-203ENST00000349748 TMEM106CQ9BVX2 250 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 OR51V1Q9H2C8 321 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 CERS4Q9HA82 394 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 CSNK1G1Q9HCP0 422 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 SEMA4GQ9NTN9 838 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 A0A0D9SEW6 157 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 H7C417 338 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 NPC1O15118 1278 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 HOXA2O43364 376 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 ARL6IP5O75915 188 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 ALPPL2P10696 532 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 CLUP10909 449 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 RHOQP17081 205 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 CST5P28325 142 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-203ENST00000349748 AFF3P51826 1226 aaKnown RBP9.7□□□□□ -0.86
CAPN3-203ENST00000349748 SERINC3Q13530 473 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 NKPD1Q17RQ9 610 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 MS4A13Q5J8X5 152 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF697Q5TEC3 545 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 NCR3LG1Q68D85 454 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 LRRC70Q7Z2Q7 622 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 FJX1Q86VR8 437 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 SCN4BQ8IWT1 228 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 C16orf78Q8WTQ4 265 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 HAVCR1Q96D42 359 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 C1orf198Q9H425 327 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 NRIP3Q9NQ35 241 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 MTFP1Q9UDX5 166 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 FLVCR1Q9Y5Y0 555 aa9.7□□□□□ -0.86
CAPN3-203ENST00000349748 LAMA2P24043 3122 aaKnown RBP9.7□□□□□ -0.86
CAPN3-203ENST00000349748 TEX13DA0A0J9YY54 714 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 M0QYG6 137 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 PIN1P1O15428 100 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 IGSF6O95976 241 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 PLGP00747 810 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 DCNP07585 359 aaKnown RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 MMP7P09237 267 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 EPCAMP16422 314 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF7P17097 686 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 SERPINF1P36955 418 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 CRYBB1P53674 252 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 RPS11P62280 158 aaKnown RBP eCLIP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 SYPL1Q16563 259 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 NIPAL3Q6P499 406 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 VHLLQ6RSH7 139 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 BTNL8Q6UX41 500 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 LRP11Q86VZ4 500 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 ZSCAN4Q8NAM6 433 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 ADAMTS17Q8TE56 1095 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 SUSD6Q92537 303 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 SAMD8Q96LT4 415 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 STEAP1Q9UHE8 339 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 C13orf42A0A1B0GVH6 325 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 SRMP19623 302 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 OR1E1P30953 314 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 SNRPNP63162 240 aaKnown RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 BTG2P78543 158 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF85Q03923 595 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 JOSD1Q15040 202 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 BIVMQ86UB2 503 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 BHLHE23Q8NDY6 225 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 OR13C2Q8NGS9 318 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 OR2L8Q8NGY9 312 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 ZBTB8AQ96BR9 441 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 MRGPRX4Q96LA9 322 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 SGK2Q9HBY8 427 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 SEMA5BQ9P283 1151 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 ST6GALNAC2Q9UJ37 374 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 KCNG2Q9UJ96 466 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 GPR55Q9Y2T6 319 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 WIF1Q9Y5W5 379 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 PUS1Q9Y606 427 aaKnown RBP eCLIP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 COLEC10Q9Y6Z7 277 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 TMEM238LA0A1B0GVL6 79 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 RAMP1O60894 148 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 IL33O95760 270 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 EPPINO95925 133 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 ITGB2P05107 769 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 S1PR1P21453 382 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 TIA1P31483 386 aaKnown RBP eCLIP9.69□□□□□ -0.86
CAPN3-203ENST00000349748 FAM189A2Q15884 450 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 ZNF311Q5JNZ3 666 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 Q6ZRG5 221 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 KCTD9Q7L273 389 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 OVCH1Q7RTY7 1134 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 GALNT16Q8N428 558 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 AMER3Q8N944 861 aa9.69□□□□□ -0.86
CAPN3-203ENST00000349748 Q8WTZ3 238 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms