RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 BCL2L10Q9HD36 194 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 ZNF443Q9Y2A4 671 aaPredicted RBP13.81□□□□□ -0.2
PTBP1-201ENST00000349038 ZNF780BQ9Y6R6 833 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 A0A1W2PRU2 124 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 NRG2O14511 850 aaPredicted RBP13.81□□□□□ -0.2
PTBP1-201ENST00000349038 AIFM1O95831 613 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 CYB5AP00167 134 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 IFNGP01579 166 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 ELNP15502 786 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 CCINQ13939 588 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 SLC35D2Q76EJ3 337 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 STX12Q86Y82 276 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 DND1Q8IYX4 353 aaKnown RBP13.81□□□□□ -0.2
PTBP1-201ENST00000349038 FRMD1Q8N878 549 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 CCDC107Q8WV48 283 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 CMBLQ96DG6 245 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 INTS14Q96SY0 518 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 LGR4Q9BXB1 951 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 SMCO4Q9NRQ5 59 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 UFSP2Q9NUQ7 469 aa13.81□□□□□ -0.2
PTBP1-201ENST00000349038 TRAV1-2A0A0B4J238 106 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 LEFTY2O00292 366 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 LRP3O75074 770 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 S100A2P29034 98 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 CALCRP30988 508 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 BDH1Q02338 343 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 MLC1Q15049 377 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 C4orf17Q53FE4 359 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 MFSD12Q6NUT3 480 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 UNQ6494/PRO21346Q6UXR6 183 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 MISPQ8IVT2 679 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 GJD3Q8N144 294 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 GABRG1Q8N1C3 465 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 GVQW1Q8N7I0 195 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 OR10D4PQ8NGN7 298 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 OR6N2Q8NGY6 317 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 OR5AK2Q8NH90 309 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 FGF13Q92913 245 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 GGACTQ9BVM4 153 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 RGCCQ9H4X1 137 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 WDR87Q6ZQQ6 2873 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 COLCA2A8K830 154 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 C9JQL5 133 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 PPP1R1AQ13522 171 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 LIPNQ5VXI9 398 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 BAP18Q8IXM2 172 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 HIST1H2BAQ96A08 127 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 SGK3Q96BR1 496 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 FOXRED1Q96CU9 486 aaPredicted RBP13.8□□□□□ -0.2
PTBP1-201ENST00000349038 TGM7Q96PF1 710 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 SEMA6CQ9H3T2 930 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 MED17Q9NVC6 651 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 ZNF281Q9Y2X9 895 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 TMED7Q9Y3B3 224 aa13.8□□□□□ -0.2
PTBP1-201ENST00000349038 MCIDASD6RGH6 385 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 SOX15O60248 233 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 GLSO94925 669 aaPredicted RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 SFTPBP07988 381 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 OR13C7P0DN81 318 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 TPT1P13693 172 aaKnown RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 TSFMP43897 325 aaKnown RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 TSC22D1Q15714 1073 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 INPP5JQ15735 1006 aaPredicted RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 OVCH1Q7RTY7 1134 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 FAM220AQ7Z4H9 259 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 LRP11Q86VZ4 500 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 ZNF227Q86WZ6 799 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 ACOT4Q8N9L9 421 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 TMEM104Q8NE00 496 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 OR4K17Q8NGC6 315 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 OR4K14Q8NGD5 310 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 OR13C9Q8NGT0 318 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 RNF141Q8WVD5 230 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 NRIP2Q9BQI9 281 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 TNFSF18Q9UNG2 199 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 PUS1Q9Y606 427 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 MTCL1Q9Y4B5 1905 aaKnown RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 TRAPPC13A5PLN9 417 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 PRR32B1ATL7 298 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 RNASEK-C17orf49H0YIS7 233 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 H7C417 338 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 IGHV2-70P01814 119 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 CTSLP07711 333 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 DUSP5Q16690 384 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 TRMT12Q53H54 448 aaKnown RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 MTFP1Q9UDX5 166 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 COL4A3Q01955 1670 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 RP1P56715 2156 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 J3QRE1 110 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 NME2P1O60361 137 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 EIF4E2O60573 245 aaKnown RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 ADAP1O75689 374 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 F13BP05160 661 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 KIAA0141Q14154 515 aaPredicted RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 RPL22L1Q6P5R6 122 aaKnown RBP13.79□□□□□ -0.2
PTBP1-201ENST00000349038 UBE3DQ7Z6J8 389 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 ADIPOR2Q86V24 386 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 OR5AP2Q8NGF4 316 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 MIB2Q96AX9 1013 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms