RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LSM5Q9Y4Y9 91 aaKnown RBP13.47□□□□□ -0.25
NUP50-201ENST00000347635 RNF215Q9Y6U7 377 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 WNT1P04628 370 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 LPLP06858 475 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 EMDP50402 254 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 MVDP53602 400 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 PLP2Q04941 152 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 ACSM1Q08AH1 577 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 LRRC69Q6ZNQ3 347 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 FRMD1Q8N878 549 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 OR6M1Q8NGM8 313 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 ORAI1Q96D31 301 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 TRMT61AQ96FX7 289 aaKnown RBP13.47□□□□□ -0.25
NUP50-201ENST00000347635 GGT3PA6NGU5 568 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 AGPAT2O15120 278 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 TMEM127O75204 238 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 CEACAM5P06731 702 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 DCTDP32321 178 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 RUNX2Q13950 521 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 LPCAT3Q6P1A2 487 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 WDR88Q6ZMY6 472 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 OR4K15Q8NH41 348 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 RNF32Q9H0A6 362 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 TSPAN10Q9H1Z9 355 aaPredicted RBP13.47□□□□□ -0.25
NUP50-201ENST00000347635 SIGLEC7Q9Y286 467 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 MTCH2Q9Y6C9 303 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 RGS11O94810 467 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 BDKRB2P30411 391 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 POLR2HP52434 150 aaKnown RBP13.47□□□□□ -0.25
NUP50-201ENST00000347635 EPHA4P54764 986 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 RAG2P55895 527 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 GSG1Q2KHT4 349 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 TMPRSS11FQ6ZWK6 438 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 COX15Q7KZN9 410 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 SGPP2Q8IWX5 399 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 LINC01555Q8NAE3 123 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 NT5CQ8TCD5 201 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 CLCC1Q96S66 551 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 C20orf141Q9NUB4 165 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 VDAC3Q9Y277 283 aa13.47□□□□□ -0.25
NUP50-201ENST00000347635 MYO10Q9HD67 2058 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 HSPA12AO43301 675 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 ZNF28P17035 718 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 SDHAP31040 664 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 RRADP55042 308 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 UNQ6126/PRO20091Q6UXV3 157 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 Q6ZTK2 550 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 MISPQ8IVT2 679 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 ZNF285Q96NJ3 590 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 HRH4Q9H3N8 390 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 POMT2Q9UKY4 750 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 PLXNA1Q9UIW2 1896 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 A0A0A6YYH2 397 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 A6NJ64 397 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 PRICKLE3O43900 615 aaPredicted RBP13.46□□□□□ -0.25
NUP50-201ENST00000347635 IL33O95760 270 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 NAGAP17050 411 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 ZNF169Q14929 603 aaPredicted RBP13.46□□□□□ -0.25
NUP50-201ENST00000347635 GLDNQ6ZMI3 551 aaPredicted RBP13.46□□□□□ -0.25
NUP50-201ENST00000347635 ABHD12BQ7Z5M8 362 aaPredicted RBP13.46□□□□□ -0.25
NUP50-201ENST00000347635 OR2L13Q8N349 312 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 DLL4Q9NR61 685 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 HIF3AQ9Y2N7 669 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 EMC9Q9Y3B6 208 aa13.46□□□□□ -0.25
NUP50-201ENST00000347635 SPTY2D1-AS1A0A0U1RR47 76 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 D6RAR5 112 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 SULT1C2O00338 296 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 MRPL49Q13405 166 aaKnown RBP13.46□□□□□ -0.26
NUP50-201ENST00000347635 DOC2BQ14184 412 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 ZNF770Q6IQ21 691 aaPredicted RBP13.46□□□□□ -0.26
NUP50-201ENST00000347635 ZBTB44Q8NCP5 570 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 NPRL2Q8WTW4 380 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 OR6C1Q96RD1 312 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 ADGRL4Q9HBW9 690 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 A0A0B4J2A0 478 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 IGHA1P01876 353 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 ZP2Q05996 745 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 RSU1Q15404 277 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 SLC9A3R2Q15599 337 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 LINC00303Q3SY05 128 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 CDX2Q99626 313 aaPredicted RBP13.46□□□□□ -0.26
NUP50-201ENST00000347635 NARFLQ9H6Q4 476 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 SHPKQ9UHJ6 478 aa13.46□□□□□ -0.26
NUP50-201ENST00000347635 TRIP12Q14669 1992 aaPredicted RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 A0A1B0GX78 115 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 ANKRD61A6NGH8 418 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 TMEM200CA6NKL6 621 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 HCRTR1O43613 425 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 GALR3O60755 368 aaPredicted RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 ZNF43P17038 809 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 HSD17B7P56937 341 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 UBE2MP61081 183 aaKnown RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 POU3F1Q03052 451 aaPredicted RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 OR5M10Q6IEU7 315 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 PAPD4Q6PIY7 484 aaKnown RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 SSX6Q7RTT6 188 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 CA13Q8N1Q1 262 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 SMRP1Q8NCR6 262 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 FNDC9Q8TBE3 224 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms