RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TIGARQ9NQ88 270 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 MRPL22Q9NWU5 206 aaKnown RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 KLHL9Q9P2J3 617 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 ING1Q9UK53 422 aaPredicted RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 ZMIZ1Q9ULJ6 1067 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 COA3Q9Y2R0 106 aaPredicted RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 APC2O95996 2303 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 URB1O60287 2271 aaKnown RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 TVP23AA6NH52 213 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 ZNF726A6NNF4 738 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 ACOT7O00154 380 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 CYTIPO60759 359 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 KHDRBS3O75525 346 aaKnown RBP9.76□□□□□ -0.85
ECM1-201ENST00000346569 WISP2O76076 250 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 IGHG1P01857 330 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 PDGFAP04085 211 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 CPN1P15169 458 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 ALOX5APP20292 161 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 NR4A1P22736 598 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 GADD45AP24522 165 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 NTF4P34130 210 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 CRYBB2P43320 205 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 EIF1AXP47813 144 aaKnown RBP9.76□□□□□ -0.85
ECM1-201ENST00000346569 CLDN17P56750 224 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 OR12D2P58182 307 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 HSF2Q03933 536 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 GPR50Q13585 617 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 PCK2Q16822 640 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 CDONQ4KMG0 1287 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 TEX30Q5JUR7 227 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 ABLIM2Q6H8Q1 611 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 VASH1Q7L8A9 365 aaPredicted RBP9.76□□□□□ -0.85
ECM1-201ENST00000346569 HDDC2Q7Z4H3 204 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 TMEM123Q8N131 208 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 SYS1Q8N2H4 156 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 RFLNBQ8N5W9 214 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 FNDC8Q8TC99 324 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 ROBO4Q8WZ75 1007 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 WDYHV1Q96HA8 205 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 ZNF845Q96IR2 970 aaPredicted RBP9.76□□□□□ -0.85
ECM1-201ENST00000346569 MNTQ99583 582 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 OR51E2Q9H255 320 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 RERGLQ9H628 205 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 LIPGQ9Y5X9 500 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 ZFYVE26Q68DK2 2539 aa9.76□□□□□ -0.85
ECM1-201ENST00000346569 TRGV5A0A0B4J1U4 118 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 A0A1B0GVC2 190 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 PRR32B1ATL7 298 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 K7EM74 188 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 ZNF593O00488 134 aaPredicted RBP9.75□□□□□ -0.85
ECM1-201ENST00000346569 MT-ND5P03915 603 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 HRGP04196 525 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 PSKH1P11801 424 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 CAPZA2P47755 286 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 PMP22Q01453 160 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 GLO1Q04760 184 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 FMODQ06828 376 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 NFATC3Q12968 1075 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 SPCS2Q15005 226 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 LIPKQ5VXJ0 399 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 RPUSD3Q6P087 351 aaKnown RBP9.75□□□□□ -0.85
ECM1-201ENST00000346569 DNM1P34Q6PK57 102 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 GDPGP1Q6ZNW5 385 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 DPY19L4Q7Z388 723 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 KCTD20Q7Z5Y7 419 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 KLBQ86Z14 1044 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 MEIOBQ8N635 442 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 RBMXL3Q8N7X1 1067 aaKnown RBP9.75□□□□□ -0.85
ECM1-201ENST00000346569 NOXO1Q8NFA2 376 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 SLC26A10Q8NG04 563 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 OTOSQ8NHW6 89 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 TMEM54Q969K7 222 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 MCHR2Q969V1 340 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
ECM1-201ENST00000346569 INTS12Q96CB8 462 aaKnown RBP9.75□□□□□ -0.85
ECM1-201ENST00000346569 OR2M2Q96R28 347 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 INTS14Q96SY0 518 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 NDUFB11Q9NX14 153 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 PAQR5Q9NXK6 330 aaPredicted RBP9.75□□□□□ -0.85
ECM1-201ENST00000346569 PTTG2Q9NZH5 202 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 FOXD3Q9UJU5 478 aaPredicted RBP9.75□□□□□ -0.85
ECM1-201ENST00000346569 FLVCR1Q9Y5Y0 555 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 SIRT4Q9Y6E7 314 aaPredicted RBP9.75□□□□□ -0.85
ECM1-201ENST00000346569 ZNF407Q9C0G0 2248 aa9.75□□□□□ -0.85
ECM1-201ENST00000346569 IGKV3D-15A0A087WSY6 115 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 A0A1W2PPW3 197 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 E9PI62 339 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 NPIPA2E9PIF3 369 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 ZNF670-ZNF695F2Z2N8 137 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 NPIPA3F8WFD2 350 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 J3QLW9 94 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 SLC22A1O15245 554 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 MAGEB4O15481 346 aaPredicted RBP9.74□□□□□ -0.85
ECM1-201ENST00000346569 OGG1O15527 345 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 RRP8O43159 456 aaKnown RBP9.74□□□□□ -0.85
ECM1-201ENST00000346569 PLPP2O43688 288 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 AKAP8O43823 692 aaKnown RBP9.74□□□□□ -0.85
ECM1-201ENST00000346569 AIREO43918 545 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 GPX5O75715 221 aa9.74□□□□□ -0.85
ECM1-201ENST00000346569 MPZL1O95297 269 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms