RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 RHOFQ9HBH0 211 aa16.62■□□□□ 0.25
SMC4-201ENST00000344722 ANKRD36CQ5JPF3 1778 aa16.62■□□□□ 0.25
SMC4-201ENST00000344722 GJE1A6NN92 205 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 THBS1P07996 1170 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 CSF2RAP15509 400 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 MSR1P21757 451 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 H3F3AP84243 136 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 GSG1Q2KHT4 349 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 ZNF628Q5EBL2 1059 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 ELFN2Q5R3F8 820 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 PKD1L3Q7Z443 1732 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 FBXW5Q969U6 566 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 ADOQ96SZ5 270 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 INSM2Q96T92 566 aaPredicted RBP16.61■□□□□ 0.25
SMC4-201ENST00000344722 TMPRSS5Q9H3S3 457 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 ZCCHC4Q9H5U6 513 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 GCM1Q9NP62 436 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 OR52A1Q9UKL2 312 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 FITM1A5D6W6 292 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 CD3DP04234 171 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 FCGR2AP12318 317 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 POU3F1Q03052 451 aaPredicted RBP16.61■□□□□ 0.25
SMC4-201ENST00000344722 FAM111BQ6SJ93 734 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 SFT2D1Q8WV19 159 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 DIO2Q92813 273 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 BORCS7Q96B45 105 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 DCBLD2Q96PD2 775 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 OR5B2Q96R09 309 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 TP53TG5Q9Y2B4 290 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 NQO2P16083 231 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 ANKRD9Q96BM1 317 aaPredicted RBP16.61■□□□□ 0.25
SMC4-201ENST00000344722 ADAM19Q9H013 955 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 DOT1LQ8TEK3 1739 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 HPNP05981 417 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 CSNK1A1P48729 337 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 DIO1P49895 249 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 RAB38P57729 211 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 TMEM182Q6ZP80 229 aaPredicted RBP16.61■□□□□ 0.25
SMC4-201ENST00000344722 OR4C16Q8NGL9 310 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 PPP1R1CQ8WVI7 109 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 ZC3HAV1LQ96H79 300 aaKnown RBP16.61■□□□□ 0.25
SMC4-201ENST00000344722 TSSK2Q96PF2 358 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 PARP12Q9H0J9 701 aaKnown RBP16.61■□□□□ 0.25
SMC4-201ENST00000344722 V9GYH0 126 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 MYO10Q9HD67 2058 aa16.61■□□□□ 0.25
SMC4-201ENST00000344722 TRAV36DV7A0A075B6V5 113 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 ZNF724A8MTY0 619 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 YKT6O15498 198 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 IGLV3-25P01717 112 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 HOXA9P31269 272 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 SFTPDP35247 375 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 MAP2K6P52564 334 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 SNRPNP63162 240 aaKnown RBP16.6■□□□□ 0.25
SMC4-201ENST00000344722 C11orf87Q6NUJ2 197 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 C9orf62Q8N4C0 152 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 SLC16A11Q8NCK7 471 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 FGGYQ96C11 551 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 STACQ99469 402 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 LINC00597Q9H2U6 94 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 DCAF7P61962 342 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 ABHD17CQ6PCB6 329 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 LINC00052Q96N35 136 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 CGGBP1Q9UFW8 167 aaPredicted RBP16.6■□□□□ 0.25
SMC4-201ENST00000344722 CITO14578 2027 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 CTSLP07711 333 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 FCGR2CP31995 323 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 PSMB3P49720 205 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 RAB11AP62491 216 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 IGSF11Q5DX21 431 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 OGFOD3Q6PK18 319 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 SYT9Q86SS6 491 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 UHRF2Q96PU4 802 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 NECAP2Q9NVZ3 263 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 C20orf202A1L168 122 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 NDUFB6O95139 128 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 TBPP20226 339 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 SNRPEP62304 92 aaKnown RBP16.6■□□□□ 0.25
SMC4-201ENST00000344722 C1orf61Q13536 156 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 RPUSD3Q6P087 351 aaKnown RBP16.6■□□□□ 0.25
SMC4-201ENST00000344722 C8orf82Q6P1X6 216 aaPredicted RBP16.6■□□□□ 0.25
SMC4-201ENST00000344722 STAC2Q6ZMT1 411 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 PLEKHA2Q9HB19 425 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 KLK11Q9UBX7 282 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 ST8SIA3O43173 380 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 PHF1O43189 567 aaPredicted RBP16.6■□□□□ 0.25
SMC4-201ENST00000344722 LIM2P55344 173 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 PHF19Q5T6S3 580 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 OR51A4Q8NGJ6 313 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 HINT2Q9BX68 163 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 PDFQ9HBH1 243 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 MMP26Q9NRE1 261 aa16.6■□□□□ 0.25
SMC4-201ENST00000344722 SFTA3P0C7M3 94 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 CD37P11049 281 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 RPL12P30050 165 aaKnown RBP16.59■□□□□ 0.25
SMC4-201ENST00000344722 SDHAP31040 664 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
SMC4-201ENST00000344722 COL9A2Q14055 689 aaPredicted RBP16.59■□□□□ 0.25
SMC4-201ENST00000344722 ARHGAP11BQ3KRB8 267 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 SFRP5Q5T4F7 317 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 ATPAF1Q5TC12 328 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms