RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PPP1R1AQ13522 171 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ARHGAP19Q14CB8 494 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 SLC22A6Q4U2R8 563 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 NXPE3Q969Y0 559 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 CCDC74AQ96AQ1 378 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 FAM3DQ96BQ1 224 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 LINC00615Q96LM1 132 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF251Q9BRH9 671 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 DPP7Q9UHL4 492 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 MSRAQ9UJ68 235 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 CSAG2Q9Y5P2 127 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ETV7Q9Y603 341 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 CDH23Q9H251 3354 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 DOCK9Q9BZ29 2069 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 DCTN6O00399 190 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 C8AP07357 584 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 MUC1P15941 1255 aaPredicted RBP13.5□□□□□ -0.25
CLCN1-201ENST00000343257 NQO2P16083 231 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 ABOP16442 354 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 F2RL1P55085 397 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 ACER2Q5QJU3 275 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 METRNLQ641Q3 311 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 EDARADDQ8WWZ3 215 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 LAT2Q9GZY6 243 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 UPB1Q9UBR1 384 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 TMED7Q9Y3B3 224 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 A0A0A6YYC8 382 aaPredicted RBP13.5□□□□□ -0.25
CLCN1-201ENST00000343257 DCDC2BA2VCK2 349 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 TMEM235A6NFC5 223 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 IGLON5A6NGN9 336 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 C1orf196B1AJZ1 125 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 I3L1I5 382 aaPredicted RBP13.5□□□□□ -0.25
CLCN1-201ENST00000343257 ERGP11308 486 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 ADRB3P13945 408 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 CDNFQ49AH0 187 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 DPY19L4Q7Z388 723 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 GATSQ8NAP1 163 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 BHLHE23Q8NDY6 225 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 OR52E1Q8NGJ3 308 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 SGIP1Q9BQI5 828 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 MFRPQ9BY79 579 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 POTEKPQ9BYX7 375 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 CST11Q9H112 138 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 VSIG4Q9Y279 399 aa13.5□□□□□ -0.25
CLCN1-201ENST00000343257 SCN5AQ14524 2016 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 A0A0B4J2E0 115 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 A0A1B0GX12 115 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 HOXA2O43364 376 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 CPT2P23786 658 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 RAB28P51157 221 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 CXADRP78310 365 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 OR52W1Q6IF63 320 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 KIRREL2Q6UWL6 708 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 SLC39A5Q6ZMH5 540 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 C12orf40Q86WS4 652 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 FOXRED2Q8IWF2 684 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 RAB42Q8N4Z0 105 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 CXorf40AQ8TE69 158 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 SEMA6CQ9H3T2 930 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 RPS10P5Q9NQ39 176 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 SLC22A13Q9Y226 551 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
CLCN1-201ENST00000343257 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 COLCA2A8K830 154 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 VEGFDO43915 354 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 IL13RA1P78552 427 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 SREBF2Q12772 1141 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 FAM53BQ14153 422 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 MOGAT2Q3SYC2 334 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 SLC35D2Q76EJ3 337 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 C15orf40Q8WUR7 153 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 SMARCD2Q92925 531 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 SEH1LQ96EE3 360 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 WDR76Q9H967 626 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 DZANK1Q9NVP4 752 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 PCOLCE2Q9UKZ9 415 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 KNL1Q8NG31 2342 aa13.49□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF736B4DX44 427 aaPredicted RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 UPK3AO75631 287 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CYB5AP00167 134 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF14P17017 642 aaPredicted RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 ABCD3P28288 659 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CD80P33681 288 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 RAB11BQ15907 218 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 GVQW1Q8N7I0 195 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 ACBD4Q8NC06 268 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 OR2L3Q8NG85 312 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 ZC3H10Q96K80 434 aaKnown RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CHRDQ9H2X0 955 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 LAMP5Q9UJQ1 280 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 SERTAD3Q9UJW9 196 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 TBC1D3DA0A087WVF3 549 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 TBC1D3IA0A087WXS9 549 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 TBC1D3LB9A6J9 549 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 PQBP1O60828 265 aaKnown RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CD8AP01732 235 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 THBS1P07996 1170 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 SFTA3P0C7M3 94 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 TBC1D3HP0C7X1 549 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms