RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 CXXC4Q9H2H0 198 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 UBTD1Q9HAC8 227 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 PLEKHA6Q9Y2H5 1048 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 IER3IP1Q9Y5U9 82 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 CDH10Q9Y6N8 788 aa13.46□□□□□ -0.25
TNFRSF12A-202ENST00000341627 TEX13CA0A0J9YWL9 993 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ARRDC5A6NEK1 342 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 IMPA2O14732 288 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DEAF1O75398 565 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 UBL3O95164 117 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC2A10O95528 541 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PPP1R3DO95685 299 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PLAUP00749 431 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CBR1P16152 277 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NPR2P20594 1047 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ARR3P36575 388 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 GUCA1AP43080 201 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FMODQ06828 376 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 C3orf36Q3SXR2 165 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 MESTQ5EB52 335 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ADAM5Q6NVV9 412 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PAMR1Q6UXH9 720 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 C20orf204Q6ZNR8 217 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RASSF6Q6ZTQ3 369 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DPPA2Q7Z7J5 298 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ADCK1Q86TW2 530 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC22A24Q8N4F4 322 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NSMAFQ92636 917 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RASD2Q96D21 266 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NMD3Q96D46 503 aaKnown RBP13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SAMD8Q96LT4 415 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ERMAPQ96PL5 475 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC38A2Q96QD8 506 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FOXC2Q99958 501 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 KCNS3Q9BQ31 491 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DGCR6LQ9BY27 220 aa13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DENND2DQ9H6A0 471 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC22A23A1A5C7 686 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PRSS37A4D1T9 235 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SOCS2O14508 198 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 HS3ST1O14792 307 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ARPC3O15145 178 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 IDH3BO43837 385 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 TIPRLO75663 272 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ATE1O95260 518 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 TXNDC12O95881 172 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 HLA-HP01893 362 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RAF1P04049 648 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CD79AP11912 226 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DNASE1P24855 282 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NOS3P29474 1203 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 MRPS34P82930 218 aaKnown RBP13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 COX10Q12887 443 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CCNIQ14094 377 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 KEAP1Q14145 624 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 GSG1Q2KHT4 349 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC25A47Q6Q0C1 308 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC22A25Q6T423 547 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CLDN22Q8N7P3 220 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 KBTBD8Q8NFY9 601 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 AKAP1Q92667 903 aaKnown RBP eCLIP13.44□□□□□ -0.268e-8■■□□□ 12.4
TNFRSF12A-202ENST00000341627 UTP4Q969X6 686 aaKnown RBP13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 GTPBP3Q969Y2 492 aaKnown RBP13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 MBD6Q96DN6 1003 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DUS3LQ96G46 650 aaKnown RBP13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 KCNN2Q9H2S1 579 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ARMC1Q9NVT9 282 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PDP1Q9P0J1 537 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CRNNQ9UBG3 495 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 POU2F3Q9UKI9 436 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FBXL3Q9UKT7 428 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 AP4S1Q9Y587 144 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 MTORP42345 2549 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ITPR3Q14573 2671 aa13.44□□□□□ -0.26
TNFRSF12A-202ENST00000341627 IGHV1-18A0A0C4DH31 117 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 H7C1C5 153 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RAB36O95755 333 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 IGKV3-15P01624 115 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 IGLV1-44P01699 117 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CRYAAP02489 173 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FCGR1AP12314 374 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PRRC2AP48634 2157 aaKnown RBP13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 IDH3GP51553 393 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 LCN6P62502 163 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC36A2Q495M3 483 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC16A14Q7RTX9 510 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 MDP1Q86V88 176 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 JAZF1Q86VZ6 243 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SKA3Q8IX90 412 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ZNF611Q8N823 705 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FBXW5Q969U6 566 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NRBF2Q96F24 287 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RAB3IPQ96QF0 476 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FEVQ99581 238 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 EGLN3Q9H6Z9 239 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ZNF556Q9HAH1 456 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SIAEQ9HAT2 523 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 TBC1D23Q9NUY8 699 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 B3GNT2Q9NY97 397 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms