RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 PDHXO00330 501 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GAPDHP04406 335 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 FABP4P15090 132 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CLDN20P56880 219 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ARHGAP1Q07960 439 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ATAT1Q5SQI0 421 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 FAM71E1Q6IPT2 247 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GPR142Q7Z601 462 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 EIF5A2Q9GZV4 153 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 G3V2L1 256 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ECI2O75521 394 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 RARRES1P49788 294 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 RPL38P63173 70 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 NCMAPQ5T1S8 102 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 HBMQ6B0K9 141 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 Q8N402 240 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ADAMTS18Q8TE60 1221 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 AIG1Q9NVV5 245 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 OPTCQ9UBM4 332 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 HACL1Q9UJ83 578 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SERPINA7P05543 415 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 THP07101 528 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 MGST1P10620 155 aaKnown RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 CD1BP29016 333 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 GPR1P46091 355 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF41P51814 821 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 RPS4XP62701 263 aaKnown RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 PRAMEF20Q5VT98 475 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF439Q8NDP4 499 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 OR4K15Q8NH41 348 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 DKKL1Q9UK85 242 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 FZR1Q9UM11 496 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 CYR61O00622 381 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 OR6A2O95222 327 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 CBX7O95931 251 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 SULT1A3P0DMM9 295 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 SULT1A4P0DMN0 295 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 NDUFS1P28331 727 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 C9orf64Q5T6V5 341 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 HEPHL1Q6MZM0 1159 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 SHISA5Q8N114 240 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 OR2G2Q8NGZ5 317 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 FAM3CQ92520 227 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 ELMOD3Q96FG2 381 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 HYKKA2RU49 373 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 LRRN3E7EW58 273 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 UTS2O95399 124 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 CD33P20138 364 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 CCKARP32238 428 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 SRSF4Q08170 494 aaKnown RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 KCTD11Q693B1 232 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 CAMKMTQ7Z624 323 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 SYT12Q8IV01 421 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 OR4M2Q8NGB6 313 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 OR2I1PQ8NGU4 316 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 APH1BQ8WW43 257 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 HINT2Q9BX68 163 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 LRRN3Q9H3W5 708 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 A0A1W2PQL4 384 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 CDC14CA4D256 554 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 RPS10P46783 165 aaKnown RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 SPIN3Q5JUX0 258 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 FAM69BQ5VUD6 431 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 LCORQ96JN0 433 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 COLEC11Q9BWP8 271 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 COA3Q9Y2R0 106 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 PRKXP51817 358 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 SLC14A1Q13336 389 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 FUT10Q6P4F1 479 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 HSD17B11Q8NBQ5 300 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF675Q8TD23 568 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 WBP2Q969T9 261 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 RAB9BQ9NP90 201 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 TRAV18A0A075B6X5 111 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 TGM5O43548 720 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 LRG1P02750 347 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 CTSSP25774 331 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 RPL24P83731 157 aaKnown RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 PNRC1Q12796 327 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 GAMTQ14353 236 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 MANEALQ5VSG8 457 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 EGLN2Q96KS0 407 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 TCRBV5S1A1TA0A578 114 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 TBL1XO60907 577 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 HNRNPA3P51991 378 aaKnown RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 TLE3Q04726 772 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 TOMM34Q15785 309 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 ASTLQ6HA08 431 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 C6orf120Q7Z4R8 191 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 MMABQ96EY8 250 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 PCMT1P22061 227 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 ADAM5Q6NVV9 412 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 RPTNQ6XPR3 784 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 RGMAQ96B86 450 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 SGK2Q9HBY8 427 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 GAR1Q9NY12 217 aaKnown RBP3.26□□□□□ -1.89
SYNE1-201ENST00000341594 PAGE1O75459 146 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 ACTBL2Q562R1 376 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 GCNT6Q5T4J0 391 aa3.26□□□□□ -1.89
SYNE1-201ENST00000341594 GTPBP8Q8N3Z3 284 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms