RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CYB5R3P00387 301 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-201ENST00000340660 PAX6P26367 422 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 TACR3P29371 465 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 VDAC2P45880 294 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-201ENST00000340660 KLRD1Q13241 179 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 RUNDC3AQ59EK9 446 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 FAM201AQ5SY85 155 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 TEDDM1Q5T9Z0 273 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 METAP1DQ6UB28 335 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-201ENST00000340660 C10orf99Q6UWK7 81 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 LINC00336Q6ZUF6 198 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 HOMEZQ8IX15 550 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 C1orf52Q8N6N3 182 aaKnown RBP8.86□□□□□ -0.99
ATXN3-201ENST00000340660 ZNF614Q8N883 585 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 CDRT4Q8N9R6 151 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 PNLDC1Q8NA58 520 aaKnown RBP8.86□□□□□ -0.99
ATXN3-201ENST00000340660 OR51D1Q8NGF3 324 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 PIFOQ8TCI5 191 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 ITLN1Q8WWA0 313 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 COQ8BQ96D53 544 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 AJUBAQ96IF1 538 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 TECTBQ96PL2 329 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 FRG2BQ96QU4 278 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 CHP1Q99653 195 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 ACTRT3Q9BYD9 372 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 RNF121Q9H920 327 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 SLC12A4Q9UP95 1085 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 DTNAQ9Y4J8 743 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 CYP7B1O75881 506 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 URI1O94763 535 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-201ENST00000340660 S100BP04271 92 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-201ENST00000340660 PRPS2P11908 318 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 B4GALT1P15291 398 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 AQP5P55064 265 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 UBE2HP62256 183 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 LRRC75BQ2VPJ9 315 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 THEM4Q5T1C6 240 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 C9orf66Q5T8R8 295 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 FAM219BQ5XKK7 198 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 CD276Q5ZPR3 534 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 CDC73Q6P1J9 531 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 DRICH1Q6PGQ1 229 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-201ENST00000340660 RNF165Q6ZSG1 346 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 C18orf65Q6ZTR6 163 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 COX18Q8N8Q8 333 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 OR1J1Q8NGS3 322 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 MAIP1Q8WWC4 291 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 JAM3Q9BX67 310 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 EBPLQ9BY08 206 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 FAM234AQ9H0X4 552 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 NUP62CLQ9H1M0 184 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 CDH20Q9HBT6 801 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 TCF7L2Q9NQB0 619 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 CYSLTR2Q9NS75 346 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 CTSZQ9UBR2 303 aa8.85□□□□□ -0.99
ATXN3-201ENST00000340660 TRBV23-1A0A0A0MS06 115 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 A0A1B0GVI7 797 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 TMEM72A0PK05 275 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 F2RL2O00254 374 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 ANKRD28O15084 1053 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 FCMRO60667 390 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 SNAP29O95721 258 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 MLNP12872 115 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 EEF1B2P24534 225 aaKnown RBP8.84□□□□□ -0.99
ATXN3-201ENST00000340660 FKBP2P26885 142 aaKnown RBP8.84□□□□□ -0.99
ATXN3-201ENST00000340660 PSMB10P40306 273 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 ELK3P41970 407 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 MAGEA3P43357 314 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 MAGEA6P43360 314 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 MTNR1BP49286 362 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 CEACAM7Q14002 265 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 CHI3L2Q15782 390 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 TMEM225Q6GV28 225 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 ZNF813Q6ZN06 617 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 ZNF627Q7L945 461 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 VRK2Q86Y07 508 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 VANGL1Q8TAA9 524 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-201ENST00000340660 ZNF420Q8TAQ5 688 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-201ENST00000340660 PRSS22Q9GZN4 317 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 FARSBQ9NSD9 589 aaKnown RBP8.84□□□□□ -0.99
ATXN3-201ENST00000340660 ADPRHL2Q9NX46 363 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 DNAJB11Q9UBS4 358 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 FBXL3Q9UKT7 428 aa8.84□□□□□ -0.99
ATXN3-201ENST00000340660 NKX6-3A6NJ46 265 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 LIPT2A6NK58 231 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 TP73O15350 636 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 UBL3O95164 117 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 HSPA4LO95757 839 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 RBMY1CP0DJD4 496 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 LIPAP38571 399 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 MYCNOSP40205 109 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 PRKAG1P54619 331 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 ATP12AP54707 1039 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 CLDN17P56750 224 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 POU6F2P78424 691 aaPredicted RBP8.83□□□□□ -1
ATXN3-201ENST00000340660 OR7A5Q15622 319 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 CDONQ4KMG0 1287 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 SGO1Q5FBB7 561 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 C16orf89Q6UX73 402 aa8.83□□□□□ -1
ATXN3-201ENST00000340660 DCDC5Q6ZRR9 648 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms