RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 MED17Q9NVC6 651 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 DNAJB12Q9NXW2 375 aaKnown RBP10.86□□□□□ -0.67
USP1-201ENST00000339950 A0A0B4J2E0 115 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 A0A1B0GX12 115 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 ITGA5P08648 1049 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 DHPSP49366 369 aaPredicted RBP10.86□□□□□ -0.67
USP1-201ENST00000339950 USF2Q15853 346 aaPredicted RBP10.86□□□□□ -0.67
USP1-201ENST00000339950 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
USP1-201ENST00000339950 AMELYQ99218 206 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 UBQLN4Q9NRR5 601 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 CCDC163A0A0D9SF12 145 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 F5H5K5 113 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 PPM1BO75688 479 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 CFIP05156 583 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 DIO1P49895 249 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 MC2RQ01718 297 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 RAB11BQ15907 218 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 SLC22A6Q4U2R8 563 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 STAC2Q6ZMT1 411 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 NLRC3Q7RTR2 1065 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 ACKR4Q9NPB9 350 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 ASF1BQ9NVP2 202 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 B9D1Q9UPM9 204 aa10.86□□□□□ -0.67
USP1-201ENST00000339950 HELZP42694 1942 aaKnown RBP10.86□□□□□ -0.67
USP1-201ENST00000339950 TMEM269A0A1B0GVZ9 245 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 F8W036 122 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 KNG1P01042 644 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 RLN2P04090 185 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 SFTPBP07988 381 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 HSD11B1P28845 292 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 TAS2R20P59543 309 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 BLOC1S1P78537 153 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 IDO2Q6ZQW0 420 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 RNF113BQ8IZP6 322 aaKnown RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 ZSCAN1Q8NBB4 408 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ZNF417Q8TAU3 575 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ZNF285Q96NJ3 590 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ZNF587Q96SQ5 575 aaPredicted RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 ZNF436Q9C0F3 470 aaPredicted RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 BANF2Q9H503 90 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 METTL7AQ9H8H3 244 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 TAS2R4Q9NYW5 299 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 A0A1W2PNR3 127 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ZNF205O95201 554 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 SLC6A1P30531 599 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 RORAP35398 523 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 HYAL1Q12794 435 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ALKBH1Q13686 389 aaKnown RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 ZNF169Q14929 603 aaPredicted RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 ACKR1Q16570 336 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 CLVS2Q5SYC1 327 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 NPSR1Q6W5P4 371 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 OR6V1Q8N148 313 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 NUDCD2Q8WVJ2 157 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 NR4A3Q92570 626 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ANKRD9Q96BM1 317 aaPredicted RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 KLHL15Q96M94 604 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 PITHD1Q9GZP4 211 aaPredicted RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 CHST6Q9GZX3 395 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 CA10Q9NS85 328 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 CACNA1HO95180 2353 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 SGCEO43556 437 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 FRKP42685 505 aaPredicted RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 RIDAP52758 137 aaKnown RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 OR52W1Q6IF63 320 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 DUSP18Q8NEJ0 188 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ADAMTS14Q8WXS8 1223 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ST6GALNAC5Q9BVH7 336 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ZNF416Q9BWM5 594 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 SELENOIQ9C0D9 397 aa10.85□□□□□ -0.67
USP1-201ENST00000339950 ZNF701Q9NV72 531 aaPredicted RBP10.85□□□□□ -0.67
USP1-201ENST00000339950 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 PRAMEF26H0Y7S4 382 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 TNFSF12O43508 249 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 ACHEP22303 614 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 TLE3Q04726 772 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 BAMBIQ13145 260 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 Q499Y3 187 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 KRBOX4Q5JUW0 171 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 CD300LDQ6UXZ3 194 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 ARIH2OSQ8N7S6 290 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 LSMEM1Q8N8F7 131 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 OR10K1Q8NGX5 313 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 CUTCQ9NTM9 273 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 B3GNT2Q9NY97 397 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 OR5V1Q9UGF6 321 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 HRH3Q9Y5N1 445 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 SEC14L5O43304 696 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 RABIFP47224 123 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 ZBTB37Q5TC79 503 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 EEF1A1P5Q5VTE0 462 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 PRAMEF8Q5VWM4 474 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 PRAMEF7Q5VXH5 474 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 TEX261Q6UWH6 196 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 SLC35F3Q8IY50 421 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 OR51A2Q8NGJ7 313 aa10.84□□□□□ -0.67
USP1-201ENST00000339950 TAAR8Q969N4 342 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms