RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 C4orf32Q8N8J7 132 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 OR11L1Q8NGX0 322 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 PEBP4Q96S96 227 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 C11orf54Q9H0W9 315 aaPredicted RBP11.9□□□□□ -0.5
USP47-202ENST00000339865 STARD5Q9NSY2 213 aa11.9□□□□□ -0.5
USP47-202ENST00000339865 TMEM200CA6NKL6 621 aa11.9□□□□□ -0.51
USP47-202ENST00000339865 GRPP07492 148 aa11.9□□□□□ -0.51
USP47-202ENST00000339865 SLC25A6P12236 298 aa11.9□□□□□ -0.51
USP47-202ENST00000339865 FIGLAQ6QHK4 219 aa11.9□□□□□ -0.51
USP47-202ENST00000339865 TBPL2Q6SJ96 375 aa11.9□□□□□ -0.51
USP47-202ENST00000339865 RXFP4Q8TDU9 374 aa11.9□□□□□ -0.51
USP47-202ENST00000339865 PIGLQ9Y2B2 252 aa11.9□□□□□ -0.51
USP47-202ENST00000339865 SHISA7A6NL88 538 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 IL3RAP26951 378 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 ZNF93P35789 620 aaPredicted RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 NKX2-1P43699 371 aaPredicted RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 WNT7BP56706 349 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 GPR171O14626 319 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 ARPC3O15145 178 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 GIPP09681 153 aaPredicted RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 SHC1P29353 583 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 PPOXP50336 477 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 Q6ZN92 141 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 RPL3LQ92901 407 aaKnown RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 HLA-CQ95604 372 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 NECTIN4Q96NY8 510 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 SLC25A21Q9BQT8 299 aaPredicted RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 ACSS1Q9NUB1 689 aaPredicted RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 AQP9O43315 295 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 ITGB7P26010 798 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 PLPP7Q8NBV4 271 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.511e-6■■□□□ 14
USP47-202ENST00000339865 DHRS4Q9BTZ2 278 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 KIAA1210Q9ULL0 1709 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 OR1Q1Q15612 314 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 SLC35G1Q2M3R5 365 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 RNASEKQ6P5S7 137 aaKnown RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 MMP21Q8N119 569 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 GHSRQ92847 366 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 WDR92Q96MX6 357 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 NRIP3Q9NQ35 241 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 A0A0B4J203 849 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 SRMP19623 302 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 GDF1P27539 372 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 AGFG1P52594 562 aaKnown RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 TAS2R45P59539 299 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 LEXMQ3ZCV2 418 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 ZNF687Q8N1G0 1237 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 SUSD3Q96L08 255 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 ZNF443Q9Y2A4 671 aaPredicted RBP11.89□□□□□ -0.51
USP47-202ENST00000339865 SLC25A4P12235 298 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 TAS2R60P59551 318 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 ZNF66Q6ZN08 573 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 OR51S1Q8NGJ8 323 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 OR4A4PQ8NGN8 299 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 TMED6Q8WW62 240 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 KIRREL1Q96J84 757 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 TRAPPC4Q9Y296 219 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 ZNF835Q9Y2P0 537 aa11.89□□□□□ -0.51
USP47-202ENST00000339865 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
USP47-202ENST00000339865 CAMKMTQ7Z624 323 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 OR10X1Q8NGY0 326 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 ADGRG7Q96K78 797 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 MRGPRX2Q96LB1 330 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 MBOAT4Q96T53 435 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 FAAP24Q9BTP7 215 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SIX2Q9NPC8 291 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 ANKRD61A6NGH8 418 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SMN1Q16637 294 aaKnown RBP11.88□□□□□ -0.51
USP47-202ENST00000339865 OR10AD1Q8NGE0 317 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 OR5K2Q8NHB8 316 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 EMG1Q92979 244 aaKnown RBP11.88□□□□□ -0.51
USP47-202ENST00000339865 SLC30A3Q99726 388 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 PLSCR3Q9NRY6 295 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SPTBN2O15020 2390 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SULT1A1P50225 295 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 C19orf47Q8N9M1 422 aaKnown RBP11.88□□□□□ -0.51
USP47-202ENST00000339865 FBXO27Q8NI29 283 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 TWSG1Q9GZX9 223 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 KIAA1456Q9P272 454 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 CSF3P09919 207 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 MPC1LP0DKB6 136 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 RPS25P62851 125 aaKnown RBP11.88□□□□□ -0.51
USP47-202ENST00000339865 GTDC1Q4AE62 458 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SMUG1Q53HV7 270 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SLC35E4Q6ICL7 350 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SLC46A3Q7Z3Q1 461 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 ADAMTS18Q8TE60 1221 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 BADQ92934 168 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 AGPAT4Q9NRZ5 378 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 OR5K3A6NET4 321 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 DEGS1O15121 323 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 SPINK4O60575 86 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 FOLR3P41439 243 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms