RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 PTGDSP41222 190 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SLC26A5P58743 744 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MELKQ14680 651 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MS4A18Q3C1V0 323 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 TMEM255AQ5JRV8 349 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ARSKQ6UWY0 536 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 FCRLAQ7L513 359 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 KRT74Q7RTS7 529 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 FAM220AQ7Z4H9 259 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 DNAAF1Q8NEP3 725 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ZNF671Q8TAW3 534 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 NUBPLQ8TB37 319 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 THAP3Q8WTV1 239 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 METTL21AQ8WXB1 218 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MCHR2Q969V1 340 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 FAM122AQ96E09 287 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ARL5BQ96KC2 179 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 GFM1Q96RP9 751 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SPSB2Q99619 263 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 LIN7BQ9HAP6 207 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 PLEKHA1Q9HB21 404 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 PAQR5Q9NXK6 330 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 IKZF2Q9UKS7 526 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ZNF292O60281 2723 aa11.67□□□□□ -0.54
CDK5RAP1-201ENST00000339269 CPED1A4D0V7 1026 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 FAM172BPA6NC97 362 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 A6NL46 340 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 H0YC42 278 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ZNF593O00488 134 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 PDCD5O14737 125 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 EFNA2O43921 213 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ITGA10O75578 1167 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SLC25A12O75746 678 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 DKK1O94907 266 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 PTGS2P35354 604 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ARRB1P49407 418 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 GZMKP49863 264 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MRPL28Q13084 256 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SLC17A1Q14916 467 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 NR0B2Q15466 257 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MEP1BQ16820 701 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 BCL2L15Q5TBC7 163 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 LYSMD4Q5XG99 296 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 LRRN1Q6UXK5 716 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 BAIAP2L2Q6UXY1 529 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 NHLRC1Q6VVB1 395 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SLC35D2Q76EJ3 337 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ASCL5Q7RTU5 278 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MDGA2Q7Z553 956 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 BIVMQ86UB2 503 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ZNF433Q8N7K0 673 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 THEM6Q8WUY1 208 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 PPP1R14AQ96A00 147 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ULBP3Q9BZM4 244 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 NDEL1Q9GZM8 345 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ELOVL3Q9HB03 270 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 APMAPQ9HDC9 416 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 NUDT15Q9NV35 164 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 FOXJ3Q9UPW0 622 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MRPS7Q9Y2R9 242 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 B3GALT1Q9Y5Z6 326 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 PTPRZ1P23471 2315 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 IGKV1D-43A0A0B4J1Z2 117 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 TRABD2BA6NFA1 517 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SHISA8B8ZZ34 492 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SMLR1H3BR10 107 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SLC16A7O60669 478 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MPZL1O95297 269 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MT-ND4P03905 459 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 TCRBP04435 133 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 HEXBP07686 556 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 GDNFP39905 211 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 CCR6P51684 374 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ACY1Q03154 408 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 ROM1Q03395 351 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MFGE8Q08431 387 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 TEX30Q5JUR7 227 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 FAM69BQ5VUD6 431 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 LAMTOR1Q6IAA8 161 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 PAPD4Q6PIY7 484 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 DND1Q8IYX4 353 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 KDM8Q8N371 416 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 OR6S1Q8NH40 331 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MS4A3Q96HJ5 214 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 CCDC74BQ96LY2 380 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 MED11Q9P086 117 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SUSD2Q9UGT4 822 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 PILRBQ9UKJ0 227 aa11.66□□□□□ -0.54
CDK5RAP1-201ENST00000339269 WDFY3Q8IZQ1 3526 aa11.65□□□□□ -0.54
CDK5RAP1-201ENST00000339269 TRAV6A0A075B6T7 132 aa11.65□□□□□ -0.54
CDK5RAP1-201ENST00000339269 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.65□□□□□ -0.54
CDK5RAP1-201ENST00000339269 TRBV11-1A0A0K0K1C0 115 aa11.65□□□□□ -0.54
CDK5RAP1-201ENST00000339269 TMEM212A6NML5 194 aa11.65□□□□□ -0.54
CDK5RAP1-201ENST00000339269 H3BSH0 61 aa11.65□□□□□ -0.54
CDK5RAP1-201ENST00000339269 XKRYO14609 159 aa11.65□□□□□ -0.54
CDK5RAP1-201ENST00000339269 GDF9O60383 454 aa11.65□□□□□ -0.54
CDK5RAP1-201ENST00000339269 SCRG1O75711 98 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms