RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 B3GNT6Q6ZMB0 384 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 GLB1L2Q8IW92 636 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 TSPAN14Q8NG11 270 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 TSSK2Q96PF2 358 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 CNN2Q99439 309 aaKnown RBP12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 ULBP2Q9BZM5 246 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 RERGLQ9H628 205 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 B9D1Q9UPM9 204 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 A0A087WXM4 84 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNHIT1O43257 154 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 RGS10O43665 173 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 HRGP04196 525 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 QDPRP09417 244 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 PYCR1P32322 319 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 PER3P56645 1201 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ACTC1P68032 377 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ACTA1P68133 377 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 STK11Q15831 433 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 LINC01590Q5TEZ4 76 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 RTL6Q6ICC9 239 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 PLXDC2Q6UX71 529 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 PRSS48Q7RTY5 328 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ABHD12BQ7Z5M8 362 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 WDFY1Q8IWB7 410 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 STX19Q8N4C7 294 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 GGHQ92820 318 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 MCHR2Q969V1 340 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNF775Q96BV0 537 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 LGALS12Q96DT0 336 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 PAK1IP1Q9NWT1 392 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ZFYVE26Q68DK2 2539 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 CNOT4O95628 575 aaKnown RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 RAB36O95755 333 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 IL2RAP01589 272 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 CDK1P06493 297 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 NTF4P34130 210 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 GUCA1AP43080 201 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNF84P51523 738 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 LRFN4Q6PJG9 635 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNF773Q6PK81 442 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 SLC25A47Q6Q0C1 308 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 DOLPP1Q86YN1 238 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNF100Q8IYN0 542 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 C9orf106Q8NAJ2 232 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 OR51L1Q8NGJ5 315 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 OR6K3Q8NGY3 331 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ZMYND19Q96E35 227 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 SIGLEC11Q96RL6 698 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 RHNO1Q9BSD3 238 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 JAM3Q9BX67 310 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 ADGRL4Q9HBW9 690 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 FGF20Q9NP95 211 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 INPP5EQ9NRR6 644 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 CLEC4AQ9UMR7 237 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 DIMT1Q9UNQ2 313 aaKnown RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 SNX5Q9Y5X3 404 aa12.86□□□□□ -0.35
NIPAL3-202ENST00000339255 CACNA1CQ13936 2221 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 KRT33AO76009 404 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 HLA-DQA2P01906 255 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 SBK2P0C263 348 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 MYL12AP19105 171 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 OR3A2P47893 321 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 TUBA4AP68366 448 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 HSF2Q03933 536 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 GCNT2Q8N0V5 402 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 SLC26A10Q8NG04 563 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 OR51G2Q8NGK0 314 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 TMEM80Q96HE8 168 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 MYCBPQ99417 103 aaPredicted RBP12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 MNTQ99583 582 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 CDCA4Q9BXL8 241 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 VCX3AQ9NNX9 186 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 MALT1Q9UDY8 824 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 SCOCQ9UIL1 159 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 COMMD3-BMI1R4GMX3 469 aa12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 NCOA6Q14686 2063 aaPredicted RBP12.85□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNF587BE7ETH6 402 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 DHHO43323 396 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 IGHA1P01876 353 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 LAP3P28838 519 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 RNLSQ5VYX0 342 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 SLC16A9Q7RTY1 509 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 SVOPQ8N4V2 548 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 ACBD7Q8N6N7 88 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 OR52I1Q8NGK6 324 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 ALKBH3Q96Q83 286 aaPredicted RBP12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 INTS14Q96SY0 518 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 MRPS26Q9BYN8 205 aaKnown RBP12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 CRLF2Q9HC73 371 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 CHCHD3Q9NX63 227 aaKnown RBP12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 KCNG2Q9UJ96 466 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 COA3Q9Y2R0 106 aaPredicted RBP12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 PCNX1Q96RV3 2341 aa12.84□□□□□ -0.35
NIPAL3-202ENST00000339255 SPENQ96T58 3664 aaKnown RBP12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 TRIM64CA6NLI5 447 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 RPL36A-HNRNPH2H7BZ11 118 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms