RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 SMYD1Q8NB12 490 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 ICA1LQ8NDH6 482 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 OR4K5Q8NGD3 323 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 FGFBP3Q8TAT2 258 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 SLC26A7Q8TE54 656 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 ELMOD3Q96FG2 381 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 CCDC28BQ9BUN5 200 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 SLC19A3Q9BZV2 496 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 EGLN1Q9GZT9 426 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 OR51B6Q9H340 312 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 RABEP2Q9H5N1 569 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 NTN4Q9HB63 628 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 SLCO1B3Q9NPD5 702 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 DDX28Q9NUL7 540 aaKnown RBP12.14□□□□□ -0.47
COMMD4-202ENST00000338995 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 VAPAQ9P0L0 249 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 SLAMF8Q9P0V8 285 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 STX18Q9P2W9 335 aaKnown RBP12.14□□□□□ -0.47
COMMD4-202ENST00000338995 ZNF229Q9UJW7 825 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 RAB21Q9UL25 225 aa12.14□□□□□ -0.47
COMMD4-202ENST00000338995 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 A0A1W2PRG6 482 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 PLSCR5A0PG75 271 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 CENPBD1B2RD01 187 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 M0QX08 132 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 TPST2O60704 377 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 NCR1O76036 304 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 GCH1P30793 250 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 LIPAP38571 399 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 NPTX1Q15818 432 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 ENTPD8Q5MY95 495 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 AVPI1Q5T686 147 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 WDR88Q6ZMY6 472 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 USP51Q70EK9 711 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 C1QL2Q7Z5L3 287 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 COMTD1Q86VU5 262 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 FUNDC1Q8IVP5 155 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 RSPO3Q9BXY4 272 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-202ENST00000338995 C7orf69Q9H7B7 122 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 SAP30LQ9HAJ7 183 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 CCNB1IP1Q9NPC3 277 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 G6PC2Q9NQR9 355 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 CYSLTR2Q9NS75 346 aa12.13□□□□□ -0.47
COMMD4-202ENST00000338995 TRAPPC13A5PLN9 417 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 CPSF4LA6NMK7 179 aaKnown RBP12.12□□□□□ -0.47
COMMD4-202ENST00000338995 MCIDASD6RGH6 385 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 BLOC1S5-TXNDC5H3BN57 136 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 M0R3H8 397 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 IGHV3-13P01766 116 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 NR2C1P13056 603 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 CCL2P13500 99 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 CCNOP22674 350 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 GUCA1AP43080 201 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-202ENST00000338995 ZNF81P51508 661 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 ARFIP2P53365 341 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 TSTQ16762 297 aaKnown RBP12.12□□□□□ -0.47
COMMD4-202ENST00000338995 DUSP7Q16829 419 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 CYP51A1Q16850 503 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 AGKQ53H12 422 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 PAGE3Q5JUK9 113 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 NANOGNBQ7Z5D8 188 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 PATL1Q86TB9 770 aaKnown RBP12.12□□□□□ -0.47
COMMD4-202ENST00000338995 MSRB3Q8IXL7 192 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 ST7LQ8TDW4 575 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 RASSF5Q8WWW0 418 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 MCHR2Q969V1 340 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 C7orf26Q96N11 449 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 ARHGDIGQ99819 225 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 SIAEQ9HAT2 523 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 WIPI2Q9Y4P8 454 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 WNK2Q9Y3S1 2297 aa12.12□□□□□ -0.47
COMMD4-202ENST00000338995 ANK2Q01484 3957 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 IGHV2-5P01817 119 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 EGR1P18146 543 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 CD247P20963 164 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 IDH3AP50213 366 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 DAP3P51398 398 aaKnown RBP12.11□□□□□ -0.47
COMMD4-202ENST00000338995 FOXL1Q12952 345 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 MELKQ14680 651 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 RUNDC3AQ59EK9 446 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 INTS11Q5TA45 600 aaKnown RBP12.11□□□□□ -0.47
COMMD4-202ENST00000338995 WDFY1Q8IWB7 410 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 ALDH16A1Q8IZ83 802 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 LRRC18Q8N456 261 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 PAQR4Q8N4S7 273 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-202ENST00000338995 OR6T1Q8NGN1 323 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 ADAMTS16Q8TE57 1224 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 CCL17Q92583 94 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 GAL3ST1Q99999 423 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 LEF1Q9UJU2 399 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-202ENST00000338995 TRIM33Q9UPN9 1127 aa12.11□□□□□ -0.47
COMMD4-202ENST00000338995 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
COMMD4-202ENST00000338995 GMNCA6NCL1 334 aa12.1□□□□□ -0.47
COMMD4-202ENST00000338995 KPNA4O00629 521 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-202ENST00000338995 AVPP01185 164 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms