RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TIGD4Q8IY51 512 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 CMTM4Q8IZR5 234 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 CADM2Q8N3J6 435 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 RFLNBQ8N5W9 214 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 OR4D9Q8NGE8 314 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 OR9A4Q8NGU2 314 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 OR6S1Q8NH40 331 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 C16orf52Q8NHV5 167 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 PATE1Q8WXA2 126 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 PHF21AQ96BD5 680 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 MVB12AQ96EY5 273 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 S100A16Q96FQ6 103 aaKnown RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 MAP6Q96JE9 813 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 GFI1Q99684 422 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 CMKLR1Q99788 373 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 NUDT22Q9BRQ3 303 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 SEMA4CQ9C0C4 833 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 LAT2Q9GZY6 243 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 OR10A5Q9H207 317 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 HRASLSQ9HDD0 168 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 NOX4Q9NPH5 578 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 DLL4Q9NR61 685 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 MED9Q9NWA0 146 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 ANKRD10Q9NXR5 420 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 TAS2R5Q9NYW4 299 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 HCN3Q9P1Z3 774 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 EIF3KQ9UBQ5 218 aaKnown RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 ZNF107Q9UII5 783 aaPredicted RBP9.76□□□□□ -0.85
RTN3-201ENST00000338850 FOXJ3Q9UPW0 622 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 COL6A6A6NMZ7 2263 aa9.76□□□□□ -0.85
RTN3-201ENST00000338850 SETXQ7Z333 2677 aaKnown RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 FRG2CA6NGY1 282 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 OR6C65A6NJZ3 312 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 ELOA3DA6NLF2 546 aaPredicted RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 C9orf172C9J069 976 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 TO15178 435 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 CDC40O60508 579 aaKnown RBP eCLIP9.75□□□□□ -0.85
RTN3-201ENST00000338850 SELENOFO60613 162 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 RGS11O94810 467 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 MT-ATP6P00846 226 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 IGHMP01871 453 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 GYPBP06028 91 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 LIPCP11150 499 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 DNASE1P24855 282 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 CD1CP29017 333 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 CAPZBP47756 277 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 PTH2RP49190 550 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 CAPZA1P52907 286 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 RAP2BP61225 183 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 SRSF6Q13247 344 aaKnown RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 ELOA3BQ3SY89 546 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 EEF1A1P5Q5VTE0 462 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 GLDNQ6ZMI3 551 aaPredicted RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 STAC2Q6ZMT1 411 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 ZNF574Q6ZN55 896 aaPredicted RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 CDH26Q8IXH8 852 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 ZNF614Q8N883 585 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 ZSCAN1Q8NBB4 408 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 ZNF680Q8NEM1 530 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 ELOA3Q8NG57 546 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 OR11G2Q8NGC1 345 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 OR13C5Q8NGS8 318 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 FCAMRQ8WWV6 532 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 ASB17Q8WXJ9 295 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 RGP1Q92546 391 aaPredicted RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 KLHL15Q96M94 604 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 OR1F2PQ96R84 312 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 NMNAT3Q96T66 252 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 ZNF436Q9C0F3 470 aaPredicted RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 ADAM19Q9H013 955 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 WDR76Q9H967 626 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 GPN1Q9HCN4 374 aaPredicted RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 FOXJ2Q9P0K8 574 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 SLC23A1Q9UHI7 598 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 MGAT4AQ9UM21 535 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 PLCL2Q9UPR0 1127 aa9.75□□□□□ -0.85
RTN3-201ENST00000338850 AK6Q9Y3D8 172 aaKnown RBP9.75□□□□□ -0.85
RTN3-201ENST00000338850 TRAV6A0A075B6T7 132 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 A0A0A6YYH2 397 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 IGHV5-10-1A0A0J9YXX1 117 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 A6NJ64 397 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 OR4C45A6NMZ5 311 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 LEUTXA8MZ59 168 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 SULT1C2O00338 296 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 ZNF264O43296 627 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 AKR7A2O43488 359 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 EIF4E2O60573 245 aaKnown RBP9.74□□□□□ -0.85
RTN3-201ENST00000338850 GLSO94925 669 aaPredicted RBP9.74□□□□□ -0.85
RTN3-201ENST00000338850 OR2A4O95047 310 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 NDUFB6O95139 128 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 ZFPL1O95159 310 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 RENP00797 406 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 CCL4P13236 92 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 NAA10P41227 235 aaPredicted RBP9.74□□□□□ -0.85
RTN3-201ENST00000338850 SRP9P49458 86 aaKnown RBP9.74□□□□□ -0.85
RTN3-201ENST00000338850 ART1P52961 327 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 BAMBIQ13145 260 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 SQSTM1Q13501 440 aa9.74□□□□□ -0.85
RTN3-201ENST00000338850 MPPED2Q15777 294 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms