RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF485Q8NCK3 441 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 ENPP5Q9UJA9 477 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 H3BMQ9 156 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 J3QLW9 94 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 CCRL2O00421 344 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 MAGEB4O15481 346 aaPredicted RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 KHDRBS3O75525 346 aaKnown RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 ZNF19P17023 458 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 RPS27P42677 84 aaKnown RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 BLVRAP53004 296 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 LSM3P62310 102 aaKnown RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 LIPKQ5VXJ0 399 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 SLC16A12Q6ZSM3 486 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 DPY19L4Q7Z388 723 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 KLBQ86Z14 1044 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 ABHD3Q8WU67 409 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 RAB2BQ8WUD1 216 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 SNX33Q8WV41 574 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 C4orf36Q96KX1 117 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 PRRG4Q9BZD6 226 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 PAQR5Q9NXK6 330 aaPredicted RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 MCTS1Q9ULC4 181 aaKnown RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 CAMK2AQ9UQM7 478 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 ZNF716A6NP11 495 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 ZNF670-ZNF695F2Z2N8 137 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 ZNF701M0R085 212 aaPredicted RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 ZNF593O00488 134 aaPredicted RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 CYTIPO60759 359 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 WISP2O76076 250 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 MPZL1O95297 269 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 LALBAP00709 142 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 SELENOPP49908 381 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 UCNP55089 124 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 OR12D2P58182 307 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 CXADRP78310 365 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 SSX1Q16384 188 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 MEP1BQ16820 701 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 ABLIM2Q6H8Q1 611 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 ZFP41Q8N8Y5 198 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 OR6N1Q8NGY5 312 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 OR2M2Q96R28 347 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 TAAR6Q96RI8 345 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 MRPL22Q9NWU5 206 aaKnown RBP13.06□□□□□ -0.32
CBX3-201ENST00000337620 BABAM2Q9NXR7 383 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 LAMP5Q9UJQ1 280 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 B3GNT3Q9Y2A9 372 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 FLVCR1Q9Y5Y0 555 aa13.06□□□□□ -0.32
CBX3-201ENST00000337620 IGHG3P01860 377 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 MT-ND5P03915 603 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 QDPRP09417 244 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 GADD45AP24522 165 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 CSNK1A1P48729 337 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 ADAM8P78325 824 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 TP53I3Q53FA7 332 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 FNDC9Q8TBE3 224 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 THEM6Q8WUY1 208 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 RPL3LQ92901 407 aaKnown RBP13.05□□□□□ -0.32
CBX3-201ENST00000337620 MCHR2Q969V1 340 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 WDYHV1Q96HA8 205 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 DOK1Q99704 481 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 YIPF3Q9GZM5 350 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 MARCH7Q9H992 704 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 ING1Q9UK53 422 aaPredicted RBP13.05□□□□□ -0.32
CBX3-201ENST00000337620 TP53TG5Q9Y2B4 290 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 IGF2RP11717 2491 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 ATMQ13315 3056 aa13.05□□□□□ -0.32
CBX3-201ENST00000337620 SPENQ96T58 3664 aaKnown RBP13.05□□□□□ -0.32
CBX3-201ENST00000337620 CENPBD1B2RD01 187 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 C1QTNF9BB2RNN3 333 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 PSMD9O00233 223 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 AKAP8O43823 692 aaKnown RBP13.04□□□□□ -0.32
CBX3-201ENST00000337620 C1QTNF9P0C862 333 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 CPN1P15169 458 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 HSF2Q03933 536 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 PLEKHN1Q494U1 663 aaPredicted RBP13.04□□□□□ -0.32
CBX3-201ENST00000337620 CDC20BQ86Y33 519 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 GLB1L2Q8IW92 636 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 FNDC8Q8TC99 324 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 UFD1Q92890 307 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 SEC61A2Q9H9S3 476 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 ISYNA1Q9NPH2 558 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 GLTPQ9NZD2 209 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 LUZP4Q9P127 313 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 KLHDC2Q9Y2U9 406 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 A0A1W2PPL8 197 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 ZNHIT1O43257 154 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 AIREO43918 545 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 GABARAPO95166 117 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 ATE1O95260 518 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 SPARCP09486 303 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 ZNF823P16415 610 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 CPEP16870 476 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 PTGS2P35354 604 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 ACTA2P62736 377 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 ACTG2P63267 376 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 CTF1Q16619 201 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 HIST3H3Q16695 136 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 LRFN4Q6PJG9 635 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 AAED1Q7RTV5 226 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 PHC2Q8IXK0 858 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms