RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PNLIPRP2P54317 469 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 SGCBQ16585 318 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 PLPP7Q8NBV4 271 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 NIPAL2Q9H841 368 aa17.05■□□□□ 0.32
RFTN1-201ENST00000334133 EIF4E2O60573 245 aaKnown RBP17.04■□□□□ 0.32
RFTN1-201ENST00000334133 ART1P52961 327 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 OR7A5Q15622 319 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 INPP5JQ15735 1006 aaPredicted RBP17.04■□□□□ 0.32
RFTN1-201ENST00000334133 GUSBP11Q6P575 273 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 OR11G2Q8NGC1 345 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 GPR148Q8TDV2 347 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 FCAMRQ8WWV6 532 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 C4orf45Q96LM5 186 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 TMEM185BQ9H7F4 350 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 MED29Q9NX70 200 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 FBXL3Q9UKT7 428 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 TRBV5-5A0A0J9YX44 114 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 KRT33AO76009 404 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 AHSA1O95433 338 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 TNK1Q13470 666 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 CORO6Q6QEF8 472 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 GTPBP2Q9BX10 602 aaKnown RBP17.04■□□□□ 0.32
RFTN1-201ENST00000334133 CHIAQ9BZP6 476 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 AKIRIN1Q9H9L7 192 aaPredicted RBP17.04■□□□□ 0.32
RFTN1-201ENST00000334133 KLHL9Q9P2J3 617 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 A8MVM7 634 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 ARPC1BO15143 372 aaKnown RBP17.04■□□□□ 0.32
RFTN1-201ENST00000334133 KDM4BO94953 1096 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 IGF2P01344 180 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 ARRB1P49407 418 aaPredicted RBP17.04■□□□□ 0.32
RFTN1-201ENST00000334133 SHBQ15464 509 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 PTCRAQ6ISU1 281 aaPredicted RBP17.04■□□□□ 0.32
RFTN1-201ENST00000334133 Q6ZTK2 550 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 KRT77Q7Z794 578 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 OR5M1Q8NGP8 315 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 SEC22CQ9BRL7 303 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 EMC6Q9BV81 110 aa17.04■□□□□ 0.32
RFTN1-201ENST00000334133 SDK2Q58EX2 2172 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 ERVH48-1M5A8F1 160 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 PLPP3O14495 311 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 EIF1AYO14602 144 aaKnown RBP17.03■□□□□ 0.32
RFTN1-201ENST00000334133 POU3F3P20264 500 aaPredicted RBP17.03■□□□□ 0.32
RFTN1-201ENST00000334133 TAS2R20P59543 309 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 FOXK1P85037 733 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 GUCA2AQ02747 115 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 EIF2B1Q14232 305 aaKnown RBP17.03■□□□□ 0.32
RFTN1-201ENST00000334133 BTN2A1Q7KYR7 527 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 C9orf62Q8N4C0 152 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 ZNF441Q8N8Z8 693 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 APCDD1LQ8NCL9 501 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 ZNF431Q8TF32 576 aaPredicted RBP17.03■□□□□ 0.32
RFTN1-201ENST00000334133 PHYHIPQ92561 330 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 DCBLD2Q96PD2 775 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 CITED4Q96RK1 184 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 ZFP64Q9NPA5 681 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 SLC22A23A1A5C7 686 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 TO15178 435 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 GSTZ1O43708 216 aaPredicted RBP17.03■□□□□ 0.32
RFTN1-201ENST00000334133 HEXBP07686 556 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 SSTR2P30874 369 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 C19orf57Q0VDD7 668 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 SLC17A1Q14916 467 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 SLC25A25Q6KCM7 469 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 GRINAQ7Z429 371 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 ZNF519Q8TB69 540 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 OR8B4Q96RC9 309 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 MFRPQ9BY79 579 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 STMN3Q9NZ72 180 aa17.03■□□□□ 0.32
RFTN1-201ENST00000334133 IGKV1D-43A0A0B4J1Z2 117 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 NPIPB7O75200 414 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 ITGA5P08648 1049 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 MAPK3P27361 379 aaPredicted RBP17.02■□□□□ 0.32
RFTN1-201ENST00000334133 EIF1AXP47813 144 aaKnown RBP17.02■□□□□ 0.32
RFTN1-201ENST00000334133 SLC22A10Q63ZE4 541 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 NDUFAF7Q7L592 441 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 ABHD6Q9BV23 337 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 TXNIPQ9H3M7 391 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 APMAPQ9HDC9 416 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 TMEM14AQ9Y6G1 99 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 RALGAPA1Q6GYQ0 2036 aa17.02■□□□□ 0.32
RFTN1-201ENST00000334133 IGLV1-36A0A0B4J1U3 117 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 A0A1W2PQD3 144 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 GABARAPH6UMI1 98 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 GPR171O14626 319 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 ADAM10O14672 748 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 ZNF254O75437 659 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 IFNGR1P15260 489 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 DHPSP49366 369 aaPredicted RBP17.02■□□□□ 0.31
RFTN1-201ENST00000334133 EGR3Q06889 387 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 HACD4Q5VWC8 232 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 BIVMQ86UB2 503 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 PLCZ1Q86YW0 608 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.31
RFTN1-201ENST00000334133 HAVCR1Q96D42 359 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 NXPE2Q96DL1 559 aa17.02■□□□□ 0.31
RFTN1-201ENST00000334133 TRBV11-1A0A0K0K1C0 115 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 TMEM212A6NML5 194 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 ANXA7P20073 488 aaKnown RBP17.01■□□□□ 0.31
RFTN1-201ENST00000334133 RAD52P43351 418 aa17.01■□□□□ 0.31
RFTN1-201ENST00000334133 SELENOPP49908 381 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms