RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 A0A087WV48 116 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 TRGV5A0A0B4J1U4 118 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 TFECO14948 347 aaPredicted RBP20.72■□□□□ 0.91
TSEN54-201ENST00000333213 RAB36O95755 333 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 MRPL3P09001 348 aaKnown RBP20.72■□□□□ 0.91
TSEN54-201ENST00000333213 ZNF43P17038 809 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 GADD45AP24522 165 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 ETV1P50549 477 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 SLC17A1Q14916 467 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 C3AR1Q16581 482 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 PLXDC2Q6UX71 529 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 SYT14Q8NB59 555 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 CHAC2Q8WUX2 184 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 ROBO4Q8WZ75 1007 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 SNX18Q96RF0 628 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 PEX16Q9Y5Y5 336 aa20.72■□□□□ 0.91
TSEN54-201ENST00000333213 RENP00797 406 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 SBK2P0C263 348 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 ETFDHQ16134 617 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 TIMM50Q3ZCQ8 353 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 C19orf48Q6RUI8 117 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 CREB3L2Q70SY1 520 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 OR5M11Q96RB7 305 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 TIMP4Q99727 224 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 NAA11Q9BSU3 229 aaPredicted RBP20.71■□□□□ 0.91
TSEN54-201ENST00000333213 MRPL13Q9BYD1 178 aaKnown RBP20.71■□□□□ 0.91
TSEN54-201ENST00000333213 LDAHQ9H6V9 325 aa20.71■□□□□ 0.91
TSEN54-201ENST00000333213 DSPP15924 2871 aaKnown RBP20.71■□□□□ 0.91
TSEN54-201ENST00000333213 SLC35F4A4IF30 521 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 IGHG3P01860 377 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 IGHA1P01876 353 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 LIMS3P0CW19 117 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 LIMS4P0CW20 117 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 CTLA4P16410 223 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 S100A5P33763 92 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 CXADRP78310 365 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 PON3Q15166 354 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 EEF1A1P5Q5VTE0 462 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 RNLSQ5VYX0 342 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 OR6K6Q8NGW6 343 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 ZNF385AQ96PM9 386 aaKnown RBP20.7■□□□□ 0.91
TSEN54-201ENST00000333213 ALG12Q9BV10 488 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 TP53TG5Q9Y2B4 290 aa20.7■□□□□ 0.91
TSEN54-201ENST00000333213 IGKV1D-43A0A0B4J1Z2 117 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 PNMA8CA0A1B0GUJ8 204 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 GLCEO94923 617 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 GPANK1O95872 356 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 ACTL6AO96019 429 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 ATP6V1E1P36543 226 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 UCNP55089 124 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 FMODQ06828 376 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 GGTLC2Q14390 218 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 POU4F3Q15319 338 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 BCL2A1Q16548 175 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 PLEKHN1Q494U1 663 aaPredicted RBP20.7■□□□□ 0.9
TSEN54-201ENST00000333213 SLC35D3Q5M8T2 416 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 ZIC4Q8N9L1 334 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 ZNF511Q8NB15 262 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 CDADC1Q9BWV3 514 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 LHX6Q9UPM6 363 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 B9D1Q9UPM9 204 aa20.7■□□□□ 0.9
TSEN54-201ENST00000333213 LSM2Q9Y333 95 aaKnown RBP20.7■□□□□ 0.9
TSEN54-201ENST00000333213 MED19A0JLT2 244 aaPredicted RBP20.69■□□□□ 0.9
TSEN54-201ENST00000333213 A6NIZ1 184 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 ZNF716A6NP11 495 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 VAMP5O95183 116 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 TFP02787 698 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 CD79BP40259 229 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 RGS6P49758 472 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 HCCSP53701 268 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 RAP1BP61224 184 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 RAP1AP62834 184 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 CAMK2DQ13557 499 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 C1DQ13901 141 aaKnown RBP20.69■□□□□ 0.9
TSEN54-201ENST00000333213 UNQ6494/PRO21346Q6UXR6 183 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 LHFPL3Q86UP9 236 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 SNX29P2Q8IUI4 249 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 SIAH3Q8IW03 269 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 NANOGP1Q8N7R0 232 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 OR9K2Q8NGE7 335 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 CPNE4Q96A23 557 aaPredicted RBP20.69■□□□□ 0.9
TSEN54-201ENST00000333213 RACGAP1Q9H0H5 632 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 RERGLQ9H628 205 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 PCDHGB7Q9Y5F8 929 aa20.69■□□□□ 0.9
TSEN54-201ENST00000333213 IRGMA1A4Y4 181 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 ZNHIT1O43257 154 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 SLC16A7O60669 478 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 PGA4P0DJD7 388 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 PGA3P0DJD8 388 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 NTF4P34130 210 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 ABLIM2Q6H8Q1 611 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 PROKR2Q8NFJ6 384 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 OR2T4Q8NH00 348 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 WDYHV1Q96HA8 205 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 EXO5Q9H790 373 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 LUZP4Q9P127 313 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 ING1Q9UK53 422 aaPredicted RBP20.68■□□□□ 0.9
TSEN54-201ENST00000333213 FKBP7Q9Y680 259 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 PIEZO2Q9H5I5 2752 aa20.68■□□□□ 0.9
TSEN54-201ENST00000333213 IGLV1-36A0A0B4J1U3 117 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms