RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 HLA-HP01893 362 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 NPR2P20594 1047 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 RPS6KA3P51812 740 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 RAB1AP62820 205 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 PIGFQ07326 219 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 TSPAN31Q12999 210 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 GK3PQ14409 553 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 TESK1Q15569 626 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 MDP1Q86V88 176 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 SPATA24Q86W54 205 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 SKA3Q8IX90 412 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 ZNF519Q8TB69 540 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 CANT1Q8WVQ1 401 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 ZNF570Q96NI8 536 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 TSPAN32Q96QS1 320 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 GPX7Q96SL4 187 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-201ENST00000332345 GPA33Q99795 319 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 DHRS9Q9BPW9 319 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 SIAEQ9HAT2 523 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 NRIP3Q9NQ35 241 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 FBXL3Q9UKT7 428 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 MOKQ9UQ07 419 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 LAMP3Q9UQV4 416 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 VSTM5A8MXK1 200 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 E7EQL1 145 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 GNGT2O14610 69 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 RAB36O95755 333 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 CST1P01037 141 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 CECR9P0C854 216 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 DANCRP0C864 163 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 ZNF26P17031 533 aaPredicted RBP12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SDHAP31040 664 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SLC6A6P31641 620 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 GSSP48637 474 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 FABP6P51161 128 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 MRPS34P82930 218 aaKnown RBP12.19□□□□□ -0.46
LIMS1-201ENST00000332345 NAAAQ02083 359 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SPOCK1Q08629 439 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 NPRL3Q12980 569 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 MICAQ29983 383 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 RFX4Q33E94 735 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SLC36A2Q495M3 483 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 AGAP6Q5VW22 663 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 TMEM53Q6P2H8 277 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SLC25A47Q6Q0C1 308 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SLC16A14Q7RTX9 510 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 FAM122BQ7Z309 247 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 ADGRG5Q8IZF4 528 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 FBXL14Q8N1E6 418 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 LRRC75A-AS1Q8N1F1 130 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 OR4F15Q8NGB8 312 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 OR4C15Q8NGM1 316 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 NSMAFQ92636 917 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 NMD3Q96D46 503 aaKnown RBP12.19□□□□□ -0.46
LIMS1-201ENST00000332345 Q96M85 177 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SH3GL3Q99963 347 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 RNF121Q9H920 327 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 ADAM18Q9Y3Q7 739 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SAMHD1Q9Y3Z3 626 aaKnown RBP12.19□□□□□ -0.46
LIMS1-201ENST00000332345 IER3IP1Q9Y5U9 82 aa12.19□□□□□ -0.46
LIMS1-201ENST00000332345 SLC22A23A1A5C7 686 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 PRSS37A4D1T9 235 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 ZNF503-AS2A6NEH8 195 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 IMPA2O14732 288 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 SLC2A10O95528 541 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 PTHP01270 115 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 GASTP01350 101 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 APEHP13798 732 aaKnown RBP12.18□□□□□ -0.46
LIMS1-201ENST00000332345 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-201ENST00000332345 PTDSS1P48651 473 aaKnown RBP12.18□□□□□ -0.46
LIMS1-201ENST00000332345 IDH3GP51553 393 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-201ENST00000332345 SGCAQ16586 387 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 PGGHGQ32M88 737 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 RPL13AP3Q6NVV1 102 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 ZNF544Q6NX49 715 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 PGBD2Q6P3X8 592 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 FANK1Q8TC84 345 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 GRIP2Q9C0E4 1043 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 OR52D1Q9H346 318 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 SEC61A2Q9H9S3 476 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 IL20RAQ9UHF4 553 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 SLC7A8Q9UHI5 535 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 U3KQV3 271 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 OTOGQ6ZRI0 2925 aa12.18□□□□□ -0.46
LIMS1-201ENST00000332345 TEX13CA0A0J9YWL9 993 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 TCRBV3S1A0A5B6 114 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 ATP6V1G2-DDX39BF2Z307 99 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 IDH3BO43837 385 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 TXNDC12O95881 172 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 SOD3P08294 240 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 BMP4P12644 408 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 PAX1P15863 534 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 ZNF14P17017 642 aaPredicted RBP12.17□□□□□ -0.46
LIMS1-201ENST00000332345 NOS3P29474 1203 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 CDAP32320 146 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 TTKP33981 857 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 GIPRP48546 466 aa12.17□□□□□ -0.46
LIMS1-201ENST00000332345 FXYD6P3P58550 94 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms