RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 LIN7BQ9HAP6 207 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 SIAEQ9HAT2 523 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 NXT1Q9UKK6 140 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 MRPS2Q9Y399 296 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 A0A1W2PPC4 97 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 CHATP28329 748 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TRHRP34981 398 aaPredicted RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 P2RX1P51575 399 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 HTRA4P83105 476 aaPredicted RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 EXT1Q16394 746 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 CLVS2Q5SYC1 327 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 PXDC1Q5TGL8 231 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 SFXN4Q6P4A7 337 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 PAQR6Q6TCH4 344 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 OR10K1Q8NGX5 313 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 ISL2Q96A47 359 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 NRIP3Q9NQ35 241 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 UGT2A1Q9Y4X1 527 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 A8MVM7 634 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 SCG5P05408 212 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 CD14P08571 375 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 HIST1H1CP16403 213 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 SERPINF1P36955 418 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 SRP9P49458 86 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 PLK5Q496M5 336 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 MFFQ9GZY8 342 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TDRD15B5MCY1 1934 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 DLEC1Q9Y238 1755 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 YKT6O15498 198 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TAS2R19P59542 299 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 YBX1P67809 324 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 C2orf76Q3KRA6 126 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 ARHGAP11BQ3KRB8 267 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 OR2I1PQ8NGU4 316 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 C16orf52Q8NHV5 167 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 HRASLS5Q96KN8 279 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TSSK2Q96PF2 358 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 OR52A1Q9UKL2 312 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 BRWD3Q6RI45 1802 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TSPAN11A1L157 253 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 MCRIP1C9JLW8 97 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 GAPDHSO14556 408 aaPredicted RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 DPM1O60762 260 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 FBXO24O75426 580 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 GUSBP08236 651 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 CASP3P42574 277 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SLC6A12P48065 614 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 CCR6P51684 374 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SORDQ00796 357 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 RUNX2Q13950 521 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 FAM69AQ5T7M9 428 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ACSM5Q6NUN0 579 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 H1FNTQ75WM6 255 aaPredicted RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 Q7L0L9 218 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 VASH2Q86V25 355 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SPACA5Q96QH8 159 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 GPR173Q9NS66 373 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ACOXLQ9NUZ1 547 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 CBR1P16152 277 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 GPX2P18283 190 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TAS2R20P59543 309 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 MPEG1Q2M385 716 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SCCPDHQ8NBX0 429 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 GAB3Q8WWW8 586 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ZNF286AQ9HBT8 521 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 MOKQ9UQ07 419 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 LOXL2Q9Y4K0 774 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TOR1AO14656 332 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 IL1AP01583 271 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ZNF26P17031 533 aaPredicted RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 NFYBP25208 207 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 PTGER4P35408 488 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ACVR1Q04771 509 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 IDO2Q6ZQW0 420 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 RDH10Q8IZV5 341 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 C12orf45Q8N5I9 185 aaPredicted RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 GIMAP5Q96F15 307 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 HRASLSQ9HDD0 168 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 UFSP2Q9NUQ7 469 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SLC5A6Q9Y289 635 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TARM1B6A8C7 271 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ZGLP1P0C6A0 271 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TAGLNQ01995 201 aaKnown RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 TEKQ02763 1124 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SRSF5Q13243 272 aaKnown RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 SLC46A3Q7Z3Q1 461 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SYT9Q86SS6 491 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ZFP82Q8N141 532 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 SLC7A13Q8TCU3 470 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 STACQ99469 402 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 LRRC61Q9BV99 259 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ACER3Q9NUN7 267 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 ZNF346Q9UL40 294 aaKnown RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 SCN2AQ99250 2005 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TDRD6O60522 2096 aaKnown RBP9.32□□□□□ -0.92
CHD3-201ENST00000330494 ZNF814B7Z6K7 855 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 HRO43593 1189 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 TK1P04183 234 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 QDPRP09417 244 aa9.32□□□□□ -0.92
CHD3-201ENST00000330494 PPIAP62937 165 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms