RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GJD2Q9UKL4 321 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SOWAHBA6NEL2 793 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 IFITM5A6NNB3 132 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 CASRP41180 1078 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SLC35D3Q5M8T2 416 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ANKRD16Q6P6B7 361 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 LYG2Q86SG7 212 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 CERS4Q9HA82 394 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 HOXD4P09016 255 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 OR4E1P0C645 316 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ACHEP22303 614 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 HOXC5Q00444 222 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TRNP1Q6NT89 227 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TFAP2EQ6VUC0 442 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TP53INP2Q8IXH6 220 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 OR13C9Q8NGT0 318 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 OR1E3Q8WZA6 343 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF442Q9H7R0 627 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SPATA6Q9NWH7 488 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 POP7O75817 140 aaKnown RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 POU3F4P49335 361 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 OR52W1Q6IF63 320 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 OGFOD3Q6PK18 319 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ASPGQ86U10 573 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ADIPOR2Q86V24 386 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 AMIGO3Q86WK7 504 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 MCATQ8IVS2 390 aaKnown RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 KLHDC1Q8N7A1 406 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 LRIG1Q96JA1 1093 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 WDR76Q9H967 626 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TLR9Q9NR96 1032 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 PTPRZ1P23471 2315 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 MBTPS2O43462 519 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF8P17098 575 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 TAS2R60P59551 318 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF345Q14585 488 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SLC17A1Q14916 467 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 RELL2Q8NC24 303 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 OR10D4PQ8NGN7 298 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 OR6K3Q8NGY3 331 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 DVL3Q92997 716 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 AK3Q9UIJ7 227 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 EIF3GO75821 320 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 C1orf105O95561 183 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF43P17038 809 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SFTPDP35247 375 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ACOT6Q3I5F7 207 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM31Q5JXX7 168 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 GLYATL3Q5SZD4 288 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 CST9LP1Q5W188 147 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 PRSS45Q7RTY3 260 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SDR9C7Q8NEX9 313 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 RXFP4Q8TDU9 374 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 TSLPQ969D9 159 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 OR51I2Q9H344 312 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 GNG13Q9P2W3 67 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 XKRY2A2RUG3 117 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 TAPBPO15533 448 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 F3P13726 295 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 HOXB9P17482 250 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 DUSP1P28562 367 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 CLDN12P56749 244 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 CTXN1P60606 82 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 HIST1H3AP68431 136 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 RELQ04864 619 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 MEX3BQ6ZN04 569 aaKnown RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 BAP18Q8IXM2 172 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 TOMM40LQ969M1 308 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF681Q96N22 645 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 DPH7Q9BTV6 452 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM59Q9BXS4 323 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 KLRF1Q9NZS2 232 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 RAB27BO00194 218 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 PMP2P02689 132 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 RAB11AP62491 216 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 MRPL2Q5T653 305 aaKnown RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 KLHDC8AQ8IYD2 350 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 NLGN4XQ8N0W4 816 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 OR2G3Q8NGZ4 309 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 WFIKKN2Q8TEU8 576 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 CYB5D2Q8WUJ1 264 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 DDIT4LQ96D03 193 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 RRAGCQ9HB90 399 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 MED9Q9NWA0 146 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 MRPS23Q9Y3D9 190 aaKnown RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ZFP92A6NM28 416 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SEC14L6B5MCN3 397 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 PTBP3O95758 552 aaKnown RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SLURP2P0DP57 97 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 GPR18Q14330 331 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 WBP2NLQ6ICG8 309 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 BCDIN3DQ7Z5W3 292 aaKnown RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 FAM71CQ8NEG0 241 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 F2RL3Q96RI0 385 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ALG12Q9BV10 488 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 CDCP1Q9H5V8 836 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF286AQ9HBT8 521 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 MOKQ9UQ07 419 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms