RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 FAM222BQ8WU58 562 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 FCGR1BQ92637 280 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 C10orf35Q96D05 121 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 KTI12Q96EK9 354 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 NR1H4Q96RI1 486 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 FEVQ99581 238 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF184Q99676 751 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 HES7Q9BYE0 225 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 WNT10AQ9GZT5 417 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 FGF20Q9NP95 211 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 ASF1BQ9NVP2 202 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 CLN6Q9NWW5 311 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 EXOGQ9Y2C4 368 aaKnown RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 RPL36Q9Y3U8 105 aaKnown RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 FAM215AQ9Y5M1 114 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 LIPGQ9Y5X9 500 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 MPDZO75970 2070 aa2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 EP300Q09472 2414 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-201ENST00000320280 HCFC1P51610 2035 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SHISA3A0PJX4 238 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TRIM64A6NGJ6 449 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF99A8MXY4 864 aaPredicted RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 RNF13O43567 381 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 CXCL13O43927 109 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 CLDN14O95500 239 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SNAP29O95721 258 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 CH25HO95992 272 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 GASTP01350 101 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 GAAP10253 952 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SLC2A5P22732 501 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 CFL1P23528 166 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 RPS5P46782 204 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TAS2R43P59537 309 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 RPS23P62266 143 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ACTA2P62736 377 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 GRB2P62993 217 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ACTG2P63267 376 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 GLO1Q04760 184 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SCRN3Q0VDG4 424 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 DAZAP2Q15038 168 aaPredicted RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TRAM1Q15629 374 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TRIP10Q15642 601 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 KRTAP27-1Q3LI81 207 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 KCTD21Q4G0X4 260 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 FAM27BQ5VT28 67 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 RTL6Q6ICC9 239 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ADAM5Q6NVV9 412 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ARL9Q6T311 187 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 Q6ZSR3 168 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 AAED1Q7RTV5 226 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 RBM45Q8IUH3 476 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 PYDC1Q8WXC3 89 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SMPDL3BQ92485 455 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TFAP2CQ92754 450 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 PLEKHA8Q96JA3 519 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 MUS81Q96NY9 551 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TECTBQ96PL2 329 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 BCL7BQ9BQE9 202 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SRXN1Q9BYN0 137 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TRIM8Q9BZR9 551 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 DEFB127Q9H1M4 99 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 NELFAQ9H3P2 528 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 RGCCQ9H4X1 137 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 GLTPQ9NZD2 209 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ERRFI1Q9UJM3 462 aaPredicted RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 EXOSC1Q9Y3B2 195 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 NINQ8N4C6 2090 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ZFHX2Q9C0A1 2572 aaPredicted RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 LOC100130705A0A1B0GUX0 176 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ANKRD61A6NGH8 418 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 PRR23D1E9PI22 279 aaPredicted RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 J3KTA2 159 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 IFNL4K9M1U5 179 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TRMUO75648 421 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SULT1C4O75897 302 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 INMTO95050 263 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 PRR23D2P0DMB1 279 aaPredicted RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ADORA3P0DMS8 318 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 MSR1P21757 451 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 PSMA1P25786 263 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 CD79BP40259 229 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 EVX1P49640 407 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 CLRN1P58418 232 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 CTXN1P60606 82 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 LTBQ06643 244 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 GPR50Q13585 617 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 PON3Q15166 354 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 MOGQ16653 247 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 NDUFAF6Q330K2 333 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SLC36A2Q495M3 483 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 SYS1Q8N2H4 156 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 CISD2Q8N5K1 135 aaKnown RBP2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 OR4F15Q8NGB8 312 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 PFN4Q8NHR9 129 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 PHYHIPQ92561 330 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 DACH2Q96NX9 599 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 ADI1Q9BV57 179 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 KATNB1Q9BVA0 655 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 TSSK6Q9BXA6 273 aa2.9□□□□□ -1.94
SCAMP1-201ENST00000320280 HDHD2Q9H0R4 259 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms