RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 NMNAT1Q9HAN9 279 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 ASF1BQ9NVP2 202 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 COL6A3P12111 3177 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 A0A1W2PQM1 296 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 CPED1A4D0V7 1026 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 FAAHO00519 579 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 ZIC2O95409 532 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 EIF4EP06730 217 aaKnown RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 H1F0P07305 194 aaKnown RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 DCDP81605 110 aaKnown RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 E2F1Q01094 437 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 SURF2Q15527 256 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 ZNHIT3Q15649 155 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 EIPR1Q53HC9 387 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 METAP1DQ6UB28 335 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 EID2Q8N6I1 236 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 COX18Q8N8Q8 333 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 OR4D11Q8NGI4 311 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 PRRC1Q96M27 445 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 PRDM13Q9H4Q3 707 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 FSCN3Q9NQT6 498 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 SLC13A4Q9UKG4 626 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 A4GNTQ9UNA3 340 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 IGKV3D-11A0A0A0MRZ8 115 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 ZNF705EA8MWA4 302 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 RRP8O43159 456 aaKnown RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 DBIP07108 87 aaKnown RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 CNR1P21554 472 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 SHC1P29353 583 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 EMDP50402 254 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 GABREP78334 506 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 BTG2P78543 158 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 EXOSC7Q15024 291 aaKnown RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 SLC36A2Q495M3 483 aa13.37□□□□□ -0.27
HOXA3-201ENST00000317201 ZNF770Q6IQ21 691 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 BARX1Q9HBU1 254 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-201ENST00000317201 NUP210LQ5VU65 1888 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 TMEM238LA0A1B0GVL6 79 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 FCMRO60667 390 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 ETV5P41161 510 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 RHBDD2Q6NTF9 364 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 SAMD12Q8N8I0 201 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 OIT3Q8WWZ8 545 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 VSTM2LQ96N03 204 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 ZPBPQ9BS86 351 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
HOXA3-201ENST00000317201 ZNF443Q9Y2A4 671 aaPredicted RBP13.36□□□□□ -0.27
HOXA3-201ENST00000317201 CD8B2A6NJW9 211 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 SOX14O95416 240 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 CD8BP10966 210 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 FBLP22087 321 aaKnown RBP13.36□□□□□ -0.27
HOXA3-201ENST00000317201 RAD52P43351 418 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 MLLT11Q13015 90 aaPredicted RBP13.36□□□□□ -0.27
HOXA3-201ENST00000317201 GAMTQ14353 236 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 TCEAL6Q6IPX3 200 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 COMTD1Q86VU5 262 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 LRRC18Q8N456 261 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 ARID1BQ8NFD5 2236 aaPredicted RBP13.36□□□□□ -0.27
HOXA3-201ENST00000317201 CLCC1Q96S66 551 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 CNOT2Q9NZN8 540 aaKnown RBP13.36□□□□□ -0.27
HOXA3-201ENST00000317201 PRODH2Q9UF12 536 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 PCDHB10Q9UN67 800 aa13.36□□□□□ -0.27
HOXA3-201ENST00000317201 IGHV5-10-1A0A0J9YXX1 117 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 PPIHO43447 177 aaKnown RBP13.35□□□□□ -0.27
HOXA3-201ENST00000317201 ONECUT2O95948 504 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 ADAP00813 363 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 CD2P06729 351 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 ZNF25P17030 456 aaPredicted RBP13.35□□□□□ -0.27
HOXA3-201ENST00000317201 ELAVL4P26378 380 aaKnown RBP13.35□□□□□ -0.27
HOXA3-201ENST00000317201 UBE2MP61081 183 aaKnown RBP13.35□□□□□ -0.27
HOXA3-201ENST00000317201 RAC1P63000 192 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 DGCR2P98153 550 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 DCST1Q5T197 706 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 MARCH9Q86YJ5 346 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 NAXDQ8IW45 347 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 OR6T1Q8NGN1 323 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 IFI44Q8TCB0 444 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 C20orf85Q9H1P6 137 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 TREM1Q9NP99 234 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 ZNF629Q9UEG4 869 aaPredicted RBP13.35□□□□□ -0.27
HOXA3-201ENST00000317201 GSTK1Q9Y2Q3 226 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 DNAH14Q0VDD8 3507 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 PATE3B3GLJ2 98 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 M0R3H8 397 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 RAB3DO95716 219 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 MAOAP21397 527 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 NOS3P29474 1203 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 NUTF2P61970 127 aaKnown RBP13.35□□□□□ -0.27
HOXA3-201ENST00000317201 PSG6Q00889 435 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 TRA2AQ13595 282 aaKnown RBP eCLIP13.35□□□□□ -0.27
HOXA3-201ENST00000317201 RPL13AP3Q6NVV1 102 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 PGAP1Q75T13 922 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 VRK2Q86Y07 508 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 C2orf88Q9BSF0 95 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 FNDC11Q9BVV2 318 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 RNF32Q9H0A6 362 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 NDOR1Q9UHB4 597 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 PI4KAP42356 2102 aa13.35□□□□□ -0.27
HOXA3-201ENST00000317201 A0A1B0GW55 424 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 HYAL3O43820 417 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms