RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ATPAF1Q5TC12 328 aaPredicted RBP16.41■□□□□ 0.22
SPSB4-201ENST00000310546 GALNT16Q8N428 558 aa16.41■□□□□ 0.22
SPSB4-201ENST00000310546 OR2A12Q8NGT7 310 aa16.41■□□□□ 0.22
SPSB4-201ENST00000310546 DOK4Q8TEW6 326 aa16.41■□□□□ 0.22
SPSB4-201ENST00000310546 MTHFD2LQ9H903 347 aaPredicted RBP16.41■□□□□ 0.22
SPSB4-201ENST00000310546 SLC25A13Q9UJS0 675 aa16.41■□□□□ 0.22
SPSB4-201ENST00000310546 METTL21EPA6NDL7 271 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 ERI3O43414 337 aaKnown RBP16.4■□□□□ 0.22
SPSB4-201ENST00000310546 ADH6P28332 368 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 NKAIN2Q5VXU1 208 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 OR10K2Q6IF99 312 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 ADIPOR2Q86V24 386 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 ZNF227Q86WZ6 799 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 GGACTQ9BVM4 153 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 ACTRT3Q9BYD9 372 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 COL4A3Q01955 1670 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 LRRC72A6NJI9 287 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 A6NLC8 198 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 GPR37O15354 613 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 CD74P04233 296 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 ST6GAL1P15907 406 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 CERS1P27544 350 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 CXADRP78310 365 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 FAM78AQ5JUQ0 283 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 KCTD9Q7L273 389 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 RNF113BQ8IZP6 322 aaKnown RBP16.4■□□□□ 0.22
SPSB4-201ENST00000310546 FGF13Q92913 245 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 SEMA6CQ9H3T2 930 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 XKR8Q9H6D3 395 aa16.4■□□□□ 0.22
SPSB4-201ENST00000310546 OIP5O43482 229 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 AIFM1O95831 613 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 RAB2AP61019 212 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 Q499Y3 187 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ANKRD16Q6P6B7 361 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 POMGNT2Q8NAT1 580 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 CASTOR1Q8WTX7 329 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ZNF764Q96H86 408 aaPredicted RBP16.39■□□□□ 0.21
SPSB4-201ENST00000310546 RHOVQ96L33 236 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 EDEM2Q9BV94 578 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 LGR4Q9BXB1 951 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 SEC61A2Q9H9S3 476 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ZMAT3Q9HA38 289 aaKnown RBP16.39■□□□□ 0.21
SPSB4-201ENST00000310546 OR2S2Q9NQN1 319 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ADAM18Q9Y3Q7 739 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 DMRT1Q9Y5R6 373 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 A0A1B0GTH9 108 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 A0A1B0GTQ1 180 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 hCG_1809904A0A1W2PP81 198 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 A0A1W2PR64 198 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 A0A1W2PRV1 198 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 CD2P06729 351 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 IRF4Q15306 451 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 DHCR24Q15392 516 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 NKPD1Q17RQ9 610 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 FAM76BQ5HYJ3 339 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 MRPL2Q5T653 305 aaKnown RBP16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ADAM5Q6NVV9 412 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ARHGAP11AQ6P4F7 1023 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 FAM111BQ6SJ93 734 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 TMPRSS11FQ6ZWK6 438 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ETFBKMTQ8IXQ9 262 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 OR4K17Q8NGC6 315 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 DCUN1D4Q92564 292 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 RPP25Q9BUL9 199 aaKnown RBP16.39■□□□□ 0.21
SPSB4-201ENST00000310546 AICDAQ9GZX7 198 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 MTIF3Q9H2K0 278 aaKnown RBP16.39■□□□□ 0.21
SPSB4-201ENST00000310546 TMEM100Q9NV29 134 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ALPK2Q86TB3 2170 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 C13orf42A0A1B0GVH6 325 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 PRR32B1ATL7 298 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ALOX12BO75342 701 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 TIMP2P16035 220 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 AGAP20933 346 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 CD80P33681 288 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 CLINT1Q14677 625 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ZNF658BQ4V348 819 aaPredicted RBP16.39■□□□□ 0.21
SPSB4-201ENST00000310546 LPCAT3Q6P1A2 487 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 TMEM205Q6UW68 189 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 BIVMQ86UB2 503 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 NECAB3Q96P71 396 aaPredicted RBP16.39■□□□□ 0.21
SPSB4-201ENST00000310546 NMNAT3Q96T66 252 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 ASH2LQ9UBL3 628 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 IER3IP1Q9Y5U9 82 aa16.39■□□□□ 0.21
SPSB4-201ENST00000310546 TCF20Q9UGU0 1960 aaKnown RBP16.38■□□□□ 0.21
SPSB4-201ENST00000310546 RNASEK-C17orf49H0YIS7 233 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 RDH16O75452 317 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 OR8G3PP0DMU2 310 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 POU3F4P49335 361 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 ARHGAP40Q5TG30 622 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 IL34Q6ZMJ4 242 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 ABHD13Q7L211 337 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 ZNF547Q8IVP9 402 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 SLC35F3Q8IY50 421 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 OR5AK2Q8NH90 309 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 MICU1Q9BPX6 476 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 SLC25A21Q9BQT8 299 aaPredicted RBP16.38■□□□□ 0.21
SPSB4-201ENST00000310546 EGLN1Q9GZT9 426 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 ATG5Q9H1Y0 275 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 UFSP2Q9NUQ7 469 aa16.38■□□□□ 0.21
SPSB4-201ENST00000310546 SLC27A6Q9Y2P4 619 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms