RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LINGO2Q7L985 606 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 PACRGLQ8N7B6 248 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 RDH12Q96NR8 316 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 SLC38A2Q96QD8 506 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 WACQ9BTA9 647 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 GABARAPL3Q9BY60 117 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 CMC2Q9NRP2 79 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 TMEM38BQ9NVV0 291 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 FBXL3Q9UKT7 428 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 ARPC4-TTLL3A0A0A6YYG9 625 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 EI24O14681 340 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 KHDRBS3O75525 346 aaKnown RBP15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 OR8G3PP0DMU2 310 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 CENPAP49450 140 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 MRPS34P82930 218 aaKnown RBP15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 ARF1P84077 181 aaKnown RBP15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 CDK5Q00535 292 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 LGALS3BPQ08380 585 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 PPA1Q15181 289 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 TBRG1Q3YBR2 411 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 PHYHD1Q5SRE7 291 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 LEG1Q6P5S2 330 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 SLC25A47Q6Q0C1 308 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 ZNF813Q6ZN06 617 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 CBR4Q8N4T8 237 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 FAM169BQ8N8A8 192 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 BCL2L2Q92843 193 aaPredicted RBP15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 RACGAP1Q9H0H5 632 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 SYT4Q9H2B2 425 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 VCXQ9H320 206 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 SLC17A5Q9NRA2 495 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 TMEFF2Q9UIK5 374 aaPredicted RBP15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 FKBP7Q9Y680 259 aa15.71■□□□□ 0.11
SSSCA1-201ENST00000309328 CDKN2AP42771 156 aaKnown RBP15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 BLVRAP53004 296 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 NPRL3Q12980 569 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 GINS1Q14691 196 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 DAZAP2Q15038 168 aaPredicted RBP15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 TRIP10Q15642 601 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 C3orf36Q3SXR2 165 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 WDFY1Q8IWB7 410 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 OR52E2Q8NGJ4 325 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 OR2T4Q8NH00 348 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 OR4K13Q8NH42 304 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 PLEKHA8Q96JA3 519 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 WFIKKN1Q96NZ8 548 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 NMNAT3Q96T66 252 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 KCNN2Q9H2S1 579 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 SIAEQ9HAT2 523 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 CRIM1Q9NZV1 1036 aa15.7■□□□□ 0.1
SSSCA1-201ENST00000309328 CASQ2O14958 399 aaPredicted RBP15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 UBL3O95164 117 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 CRYGSP22914 178 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC25A1P53007 311 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 NR1H2P55055 460 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 GLO1Q04760 184 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 RIPK1Q13546 671 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 PTGES3Q15185 160 aaKnown RBP15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 TAB1Q15750 504 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC35F1Q5T1Q4 408 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 C9orf135Q5VTT2 229 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 FOXL2NBQ6ZUU3 175 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 PTCHD4Q6ZW05 846 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 ZBTB46Q86UZ6 589 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 GLB1L2Q8IW92 636 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC22A24Q8N4F4 322 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 NPEPL1Q8NDH3 523 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 OR4Q3Q8NH05 313 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 NELFAQ9H3P2 528 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 RNPEPL1Q9HAU8 725 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC25A15Q9Y619 301 aa15.69■□□□□ 0.1
SSSCA1-201ENST00000309328 ZAR1LA6NP61 321 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC16A7O60669 478 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC2A10O95528 541 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 IGFBP1P08833 259 aaPredicted RBP15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 PTDSS1P48651 473 aaKnown RBP15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 FOXG1P55316 489 aaPredicted RBP15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 PCBD1P61457 104 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC34A1Q06495 639 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 FMODQ06828 376 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 SLC36A2Q495M3 483 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 BEX5Q5H9J7 111 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 SDR9C7Q8NEX9 313 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 LINC01560Q8TB33 94 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 NSMAFQ92636 917 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 ZNF837Q96EG3 531 aaPredicted RBP15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 VCX3BQ9H321 246 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 FN3KQ9H479 309 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 DOPEY2Q9Y3R5 2298 aa15.68■□□□□ 0.1
SSSCA1-201ENST00000309328 H7C1C5 153 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 SURF4O15260 269 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 B4GALT1P15291 398 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 CTLA4P16410 223 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 MSR1P21757 451 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 LAP3P28838 519 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 ARR3P36575 388 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 LCN6P62502 163 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 TSC22D1Q15714 1073 aa15.67■□□□□ 0.1
SSSCA1-201ENST00000309328 HIKESHIQ53FT3 197 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms