RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 SERPINA2P20848 420 aa10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 GABRR1P24046 479 aa10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 TGM4P49221 684 aa10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 AIMP2Q13155 320 aaKnown RBP10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 TMEM53Q6P2H8 277 aa10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 LANCL3Q6ZV70 420 aa10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 BPIFB2Q8N4F0 458 aa10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR13C5Q8NGS8 318 aa10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 DOK1Q99704 481 aa10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLIRPQ9GZT3 109 aaKnown RBP10.4□□□□□ -0.75
PCDHGC3-201ENST00000308177 ARPC5O15511 151 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 PCMT1P22061 227 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 ABCD3P28288 659 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 HTR2BP41595 481 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 CFAP77Q6ZQR2 320 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 SYT9Q86SS6 491 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 CARFQ8N187 725 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR6M1Q8NGM8 313 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 TOMM40LQ969M1 308 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 WASF3Q9UPY6 502 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 B3GALT5Q9Y2C3 310 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 TRPM7Q96QT4 1865 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 F5H5P2 479 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 VAMP5O95183 116 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 RAF1P04049 648 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 DEFA5Q01523 94 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 SELENBP1Q13228 472 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF74Q16587 644 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF767PQ75MW2 155 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 SSX6Q7RTT6 188 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 CADM3Q8N126 398 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 STEAP2Q8NFT2 490 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 GIMAP1Q8WWP7 306 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF681Q96N22 645 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 SYT3Q9BQG1 590 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 FAM86C1Q9NVL1 165 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 MED29Q9NX70 200 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 PDCD11Q14690 1871 aaKnown RBP10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 IGKV1-8A0A0C4DH67 115 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 TRABD2BA6NFA1 517 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 TCRBP04435 133 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 IGHV4-34P06331 123 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 VEGFCP49767 419 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 GJC3Q8NFK1 279 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 IL17RDQ8NFM7 739 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 PIGCQ92535 297 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 TMEM43Q9BTV4 400 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 TMEM59Q9BXS4 323 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 NOSIPQ9Y314 301 aaKnown RBP10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 ATRXP46100 2492 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 GPR171O14626 319 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 RFPL3O75679 317 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC2A1P11166 492 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 ATP1B3P54709 279 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 KCNJ8Q15842 424 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC16A12Q6ZSM3 486 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF679Q8IYX0 411 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC22A24Q8N4F4 322 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 CPT1CQ8TCG5 803 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 ANKRD9Q96BM1 317 aaPredicted RBP10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 KTI12Q96EK9 354 aaPredicted RBP10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 MRGPRX4Q96LA9 322 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 MMP25Q9NPA2 562 aa10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 EXO1Q9UQ84 846 aaKnown RBP10.39□□□□□ -0.75
PCDHGC3-201ENST00000308177 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 CYR61O00622 381 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 LIPCP11150 499 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF35P13682 527 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 RRADP55042 308 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 TAS2R31P59538 309 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 GPR85P60893 370 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 FOXK1P85037 733 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 RBMS2Q15434 407 aaKnown RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 GDPD3Q7L5L3 318 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 STK35Q8TDR2 534 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 THOC3Q96J01 351 aaKnown RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 MED18Q9BUE0 208 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 S1PR5Q9H228 398 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 UBE2J1Q9Y385 318 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 CKAP5Q14008 2032 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 TNFRSF10AO00220 468 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 CDC42EP2O14613 210 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 SULT1C4O75897 302 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 LIMS3P0CW19 117 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 LIMS4P0CW20 117 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF93P35789 620 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 MTCP1P56278 107 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 GNMTQ14749 295 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 PLCXD3Q63HM9 321 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 FAM198BQ6UWH4 519 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 YRDCQ86U90 279 aaKnown RBP10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 SFTPA2Q8IWL1 248 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR6V1Q8N148 313 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 NKAIN3Q8N8D7 197 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR8D4Q8NGM9 314 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 KCNG3Q8TAE7 436 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 MIB2Q96AX9 1013 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR51B6Q9H340 312 aa10.38□□□□□ -0.75
PCDHGC3-201ENST00000308177 TREM1Q9NP99 234 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms