RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CAMK2BQ13554 666 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 INSL4Q14641 139 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 SLC39A5Q6ZMH5 540 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 NKAIN4Q8IVV8 208 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 FIZ1Q96SL8 496 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 ZNF587Q96SQ5 575 aaPredicted RBP11.65□□□□□ -0.54
USP38-201ENST00000307017 NRIP3Q9NQ35 241 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 ACSS1Q9NUB1 689 aaPredicted RBP11.65□□□□□ -0.54
USP38-201ENST00000307017 MCRIP1C9JLW8 97 aa11.65□□□□□ -0.55
USP38-201ENST00000307017 IGFBP6P24592 240 aaPredicted RBP11.65□□□□□ -0.55
USP38-201ENST00000307017 AOAHP28039 575 aa11.65□□□□□ -0.55
USP38-201ENST00000307017 TPMTP51580 245 aa11.65□□□□□ -0.55
USP38-201ENST00000307017 ATP1B3P54709 279 aa11.65□□□□□ -0.55
USP38-201ENST00000307017 GDF7Q7Z4P5 450 aa11.65□□□□□ -0.55
USP38-201ENST00000307017 CXorf67Q86X51 503 aaPredicted RBP11.65□□□□□ -0.55
USP38-201ENST00000307017 OR52I2Q8NH67 350 aa11.65□□□□□ -0.55
USP38-201ENST00000307017 RSRP1Q9BUV0 290 aa11.65□□□□□ -0.55
USP38-201ENST00000307017 R3HDMLQ9H3Y0 253 aa11.65□□□□□ -0.55
USP38-201ENST00000307017 H0Y8X5 98 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 PRSS12P56730 875 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 SMIM15Q7Z3B0 74 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 GPR119Q8TDV5 335 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 OR2M2Q96R28 347 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 SLC46A2Q9BY10 475 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 AK3Q9UIJ7 227 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 A6NIZ1 184 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 FAM157BP0CG42 384 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 RAP1BP61224 184 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 RAP1AP62834 184 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 KCNJ10P78508 379 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 SOHLH1Q5JUK2 328 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 UNC5DQ6UXZ4 953 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 TMED6Q8WW62 240 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 FAM212BQ9NTI7 297 aaPredicted RBP11.64□□□□□ -0.55
USP38-201ENST00000307017 NSG1A0A0A6YYJ2 146 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 SERTM1A2A2V5 107 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 CRYM-AS1A6NIL9 109 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 TFAP2AP05549 437 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 FOXK2Q01167 660 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 SEMA3BQ13214 749 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 SLC2A8Q9NY64 477 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 RGPD5Q99666 1765 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 ANKUB1A6NFN9 424 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 SHISA8B8ZZ34 492 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 NDUFB7P17568 137 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 TAS2R30P59541 319 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 CA5BP1Q8WTZ4 195 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 PATE1Q8WXA2 126 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 DEFB127Q9H1M4 99 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 OR52A5Q9H2C5 316 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 H3BP45 60 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 ALOX5APP20292 161 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 HIST1H1TP22492 207 aaPredicted RBP11.64□□□□□ -0.55
USP38-201ENST00000307017 TNFSF4P23510 183 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 CD1BP29016 333 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 MPGP29372 298 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 CD80P33681 288 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 TLE4Q04727 773 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 OR6T1Q8NGN1 323 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 AKIRIN1Q9H9L7 192 aaPredicted RBP11.64□□□□□ -0.55
USP38-201ENST00000307017 SLC6A14Q9UN76 642 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 DNAJB5O75953 348 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 OR2J2O76002 312 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 KCNK2O95069 426 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 ZDHHC11BP0C7U3 371 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 GSK3AP49840 483 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 ZNF816Q0VGE8 651 aaPredicted RBP11.64□□□□□ -0.55
USP38-201ENST00000307017 EIF4HQ15056 248 aaKnown RBP11.64□□□□□ -0.55
USP38-201ENST00000307017 VAMP3Q15836 100 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 FOXB2Q5VYV0 432 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 LCTLQ6UWM7 567 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 RAB7BQ96AH8 199 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 PSORS1C1Q9UIG5 152 aa11.64□□□□□ -0.55
USP38-201ENST00000307017 PARP4Q9UKK3 1724 aaKnown RBP11.63□□□□□ -0.55
USP38-201ENST00000307017 SYT5O00445 386 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 SCG5P05408 212 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 SPATA46Q5T0L3 261 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 YRDCQ86U90 279 aaKnown RBP11.63□□□□□ -0.55
USP38-201ENST00000307017 RXFP4Q8TDU9 374 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 VRTNQ9H8Y1 702 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 FBXO4Q9UKT5 387 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 A0A1W2PNV4 684 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 UMAD1C9J7I0 102 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 DTD2Q96FN9 168 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 MBOAT4Q96T53 435 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 C1orf198Q9H425 327 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 FAM124BQ9H5Z6 455 aaPredicted RBP11.63□□□□□ -0.55
USP38-201ENST00000307017 S100A11P31949 105 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 ZNF93P35789 620 aaPredicted RBP11.63□□□□□ -0.55
USP38-201ENST00000307017 F2RL1P55085 397 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 C12orf57Q99622 126 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
USP38-201ENST00000307017 EXOSC3Q9NQT5 275 aaKnown RBP11.63□□□□□ -0.55
USP38-201ENST00000307017 STEAP1Q9UHE8 339 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 GPR31O00270 319 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 FABP4P15090 132 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 PTTG1IPP53801 180 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 TMEM244Q5VVB8 128 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms