RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ABHD17CQ6PCB6 329 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 PRICKLE2Q7Z3G6 844 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 ARMC10Q8N2F6 343 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 ARIH2OSQ8N7S6 290 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 OR9A4Q8NGU2 314 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 DOK4Q8TEW6 326 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 THEM6Q8WUY1 208 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 MCHR1Q99705 422 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 MYNNQ9NPC7 610 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 BDP1A6H8Y1 2624 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 A0A087WUU8 490 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 A0A1B0GV90 55 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 ANKRD61A6NGH8 418 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 SRPX2O60687 465 aaPredicted RBP9.95□□□□□ -0.82
LSM3-201ENST00000306024 CTSVO60911 334 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 RPP14O95059 124 aaKnown RBP9.95□□□□□ -0.82
LSM3-201ENST00000306024 GYPBP06028 91 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 EPXP11678 715 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 TPT1P13693 172 aaKnown RBP9.95□□□□□ -0.82
LSM3-201ENST00000306024 SDHAP31040 664 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 EIF2S3P41091 472 aaKnown RBP9.95□□□□□ -0.82
LSM3-201ENST00000306024 GRK6P43250 576 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 NPBWR1P48145 328 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 CDK5Q00535 292 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 CHAF1BQ13112 559 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 ZNF658BQ4V348 819 aaPredicted RBP9.95□□□□□ -0.82
LSM3-201ENST00000306024 SLC25A45Q8N413 288 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 SIRT6Q8N6T7 355 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 OR4K14Q8NGD5 310 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 CD300LFQ8TDQ1 290 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 MS4A6EQ96DS6 147 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 WDR34Q96EX3 536 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 OR14A2Q96R54 314 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 CD180Q99467 661 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 DSPPQ9NZW4 1301 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 CACNA1CQ13936 2221 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 TSTD3H0UI37 97 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 SLC25A12O75746 678 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 IFNGP01579 166 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 IL5P05113 134 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 RNH1P13489 461 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 PEBP1P30086 187 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 PTGER1P34995 402 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 KHKP50053 298 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 HSD11B2P80365 405 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 CBFBQ13951 182 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 EIF4E3Q8N5X7 224 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 OR5T3Q8NGG3 340 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 PIPOXQ9P0Z9 390 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 RARRES3Q9UL19 164 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 NPTNQ9Y639 398 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 SZT2Q5T011 3432 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 CDHR4A6H8M9 788 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 A6NCN8 305 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 ACOD1A6NK06 481 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 CCSO14618 274 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 IMPA2O14732 288 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 RAD1O60671 282 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 LIMS1P48059 325 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 MRPS10P82664 201 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 MEPCEQ7L2J0 689 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 RCBTB1Q8NDN9 531 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 OR51L1Q8NGJ5 315 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 OR51Q1Q8NH59 317 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 RAB3CQ96E17 227 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 SERINC2Q96SA4 455 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 MICU1Q9BPX6 476 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 PIGQQ9BRB3 760 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 FGF21Q9NSA1 209 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 KCND3Q9UK17 655 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 IFNA17P01571 189 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 ERGP11308 486 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 ABCD3P28288 659 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 CEBPGP53567 150 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 EEF1A1P68104 462 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 MAT1AQ00266 395 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 EEF1A2Q05639 463 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 EEF1A1P5Q5VTE0 462 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 FBXO42Q6P3S6 717 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 PAPD4Q6PIY7 484 aaKnown RBP9.94□□□□□ -0.82
LSM3-201ENST00000306024 MMP21Q8N119 569 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 OR6K6Q8NGW6 343 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 ADAMTS15Q8TE58 950 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 TMED6Q8WW62 240 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 RELTQ969Z4 430 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 ORAI1Q96D31 301 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 MEGF10Q96KG7 1140 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 NUDT22Q9BRQ3 303 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 POTEKPQ9BYX7 375 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 TOLLIPQ9H0E2 274 aa9.94□□□□□ -0.82
LSM3-201ENST00000306024 HEATR5BQ9P2D3 2071 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 IGHV1OR21-1A0A087WYE8 117 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 A0A0B4J2A0 478 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 OR5H14A6NHG9 310 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 GALR3O60755 368 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 PRKRAO75569 313 aaKnown RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 PSMB10P40306 273 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 ACY1Q03154 408 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 OR7A5Q15622 319 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 SGCAQ16586 387 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms