RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SLC25A19Q9HC21 320 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 NKX1-2Q9UD57 310 aaPredicted RBP21.49■■□□□ 1.03
HOXC9-201ENST00000303450 KLHL21Q9UJP4 597 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 ANKHD1Q8IWZ3 2542 aaKnown RBP21.48■■□□□ 1.03
HOXC9-201ENST00000303450 IGKV1D-43A0A0B4J1Z2 117 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 RIIAD1A6NNX1 92 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 SEC14L2O76054 403 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 NPRL3Q12980 569 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 LPCAT4Q643R3 524 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 SLC25A47Q6Q0C1 308 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 ZNF813Q6ZN06 617 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 P2RY8Q86VZ1 359 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 SPOCK3Q9BQ16 436 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 RERGLQ9H628 205 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 SLC24A3Q9HC58 644 aa21.48■■□□□ 1.03
HOXC9-201ENST00000303450 RRP15Q9Y3B9 282 aaKnown RBP21.48■■□□□ 1.03
HOXC9-201ENST00000303450 A0A096LPE4 126 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 A0A1W2PPZ6 126 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 SH3D21A4FU49 640 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 OR5H1A6NKK0 313 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 SLC16A7O60669 478 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 HMGN1P05114 100 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 B4GALT1P15291 398 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 SLC34A1Q06495 639 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 HIKESHIQ53FT3 197 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 TIMM23BQ5SRD1 257 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 C17orf78Q8N4C9 275 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 NPEPL1Q8NDH3 523 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 HSD17B8Q92506 261 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 BCL2L2Q92843 193 aaPredicted RBP21.47■■□□□ 1.03
HOXC9-201ENST00000303450 ZC3HAV1LQ96H79 300 aaKnown RBP21.47■■□□□ 1.03
HOXC9-201ENST00000303450 GABARAPL3Q9BY60 117 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 NUAK2Q9H093 628 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 CMC2Q9NRP2 79 aa21.47■■□□□ 1.03
HOXC9-201ENST00000303450 CTLA4P16410 223 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 ZNF3P17036 446 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 PEX2P28328 305 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 EPHA2P29317 976 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 TBRG1Q3YBR2 411 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 ZNF362Q5T0B9 420 aaPredicted RBP21.46■■□□□ 1.03
HOXC9-201ENST00000303450 DNM1P34Q6PK57 102 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 KLHL24Q6TFL4 600 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 CYB561A3Q8NBI2 242 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 ACBD4Q8NC06 268 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 SLC37A3Q8NCC5 494 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 MUCL1Q96DR8 90 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 DACH2Q96NX9 599 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 RPRD1BQ9NQG5 326 aaKnown RBP21.46■■□□□ 1.03
HOXC9-201ENST00000303450 TMEM38BQ9NVV0 291 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 CRIM1Q9NZV1 1036 aa21.46■■□□□ 1.03
HOXC9-201ENST00000303450 OR6C68A6NDL8 312 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 MGRN1O60291 552 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 COX6B1P14854 86 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 COL8A1P27658 744 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 CRABP1P29762 137 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 GUCA1AP43080 201 aaPredicted RBP21.45■■□□□ 1.02
HOXC9-201ENST00000303450 TAB1Q15750 504 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 ALKBH2Q6NS38 261 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 C22orf34Q6ZV56 151 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 ZNF627Q7L945 461 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 OR52N5Q8NH56 324 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 BOD1Q96IK1 185 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 PLEKHA8Q96JA3 519 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 TSSK2Q96PF2 358 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 SLC38A2Q96QD8 506 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 SRA1Q9HD15 236 aaKnown RBP21.45■■□□□ 1.02
HOXC9-201ENST00000303450 C8orf4Q9NR00 106 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 SLC17A5Q9NRA2 495 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 PTPN13Q12923 2485 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 ZAR1LA6NP61 321 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 CASQ2O14958 399 aaPredicted RBP21.45■■□□□ 1.02
HOXC9-201ENST00000303450 KHDRBS3O75525 346 aaKnown RBP21.45■■□□□ 1.02
HOXC9-201ENST00000303450 POLR2IP36954 125 aaKnown RBP21.45■■□□□ 1.02
HOXC9-201ENST00000303450 UBE2NP61088 152 aaKnown RBP21.45■■□□□ 1.02
HOXC9-201ENST00000303450 CRMP1Q14194 572 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 ETFDHQ16134 617 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 ZIK1Q3SY52 487 aaPredicted RBP21.45■■□□□ 1.02
HOXC9-201ENST00000303450 GALNT4Q8N4A0 578 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 PRRG3Q9BZD7 231 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 NELFAQ9H3P2 528 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 FN3KQ9H479 309 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 SEC61A2Q9H9S3 476 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 ZNF226Q9NYT6 803 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 TVP23BQ9NYZ1 205 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 UGT2A1Q9Y4X1 527 aa21.45■■□□□ 1.02
HOXC9-201ENST00000303450 PKDREJQ9NTG1 2253 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 A0A1W2PPL8 197 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 A0A1W2PR80 420 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 CASKO14936 926 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 SURF4O15260 269 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 FARS2O95363 451 aaKnown RBP21.44■■□□□ 1.02
HOXC9-201ENST00000303450 HOXB1P14653 301 aaPredicted RBP21.44■■□□□ 1.02
HOXC9-201ENST00000303450 NPR2P20594 1047 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 CDAP32320 146 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 PPA1Q15181 289 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 SNAPC1Q16533 368 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 SSX8Q7RTT4 187 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 OR6V1Q8N148 313 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 SLC22A24Q8N4F4 322 aa21.44■■□□□ 1.02
HOXC9-201ENST00000303450 FAM222BQ8WU58 562 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms