RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 TRAV1-2A0A0B4J238 106 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 A0A0B4J2A0 478 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 CD300LBA8K4G0 201 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 FBXO24O75426 580 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 ZNF254O75437 659 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 KIR2DL3P43628 341 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 P2RX1P51575 399 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 DCDP81605 110 aaKnown RBP17.69■□□□□ 0.42
TSR1-201ENST00000301364 EEF1A2Q05639 463 aaKnown RBP17.69■□□□□ 0.42
TSR1-201ENST00000301364 SLC36A2Q495M3 483 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 CA13Q8N1Q1 262 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 PLA2G12AQ9BZM1 189 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 SHPKQ9UHJ6 478 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 GALP22466 123 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 PPICP45877 212 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 HTRA3P83110 453 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 DOC2BQ14184 412 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 C14orf28Q4W4Y0 310 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 RABEPKQ7Z6M1 372 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 DCLRE1CQ96SD1 692 aaKnown RBP17.69■□□□□ 0.42
TSR1-201ENST00000301364 FKRPQ9H9S5 495 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 IGHA2P01877 340 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 SPNP16150 400 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 EPHA1P21709 976 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 OR10A3P58181 314 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 PARM1Q6UWI2 310 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 SUMF2Q8NBJ7 301 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 RSC1A1Q92681 617 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 OR2A14Q96R47 310 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 SEMA4CQ9C0C4 833 aa17.69■□□□□ 0.42
TSR1-201ENST00000301364 SIX6O95475 246 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 PMPCAQ10713 525 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 NPSR1Q6W5P4 371 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 CMTM4Q8IZR5 234 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 ARIH2OSQ8N7S6 290 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 ISG20L2Q9H9L3 353 aaKnown RBP17.68■□□□□ 0.42
TSR1-201ENST00000301364 COA3Q9Y2R0 106 aaPredicted RBP17.68■□□□□ 0.42
TSR1-201ENST00000301364 H0Y8X5 98 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 EIF1BO60739 113 aaKnown RBP17.68■□□□□ 0.42
TSR1-201ENST00000301364 ECI1P42126 302 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 EGR3Q06889 387 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 FAM122CQ6P4D5 195 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 MOB3CQ70IA8 216 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 ZMAT3Q9HA38 289 aaKnown RBP17.68■□□□□ 0.42
TSR1-201ENST00000301364 HRASLSQ9HDD0 168 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 KIF25Q9UIL4 384 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 ARID1BQ8NFD5 2236 aaPredicted RBP17.68■□□□□ 0.42
TSR1-201ENST00000301364 NT5CQ8TCD5 201 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 PIGCQ92535 297 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 TCEAL7Q9BRU2 100 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 PRAMEF27A3QJZ7 478 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 TMEM221A6NGB7 291 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 IL32P24001 234 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 AFF3P51826 1226 aaKnown RBP17.68■□□□□ 0.42
TSR1-201ENST00000301364 LUMP51884 338 aaPredicted RBP17.68■□□□□ 0.42
TSR1-201ENST00000301364 RUNX2Q13950 521 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 FGL2Q14314 439 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 PRAMEF9Q5VWM5 478 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 CD300LDQ6UXZ3 194 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 KIAA1958Q8N8K9 716 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 CNTNAP3Q9BZ76 1288 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 SLC17A4Q9Y2C5 497 aa17.68■□□□□ 0.42
TSR1-201ENST00000301364 AGAP14A8MT82 685 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 CRYBB2P43320 205 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 MAP2K6P52564 334 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 ESX1Q8N693 406 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 LAT2Q9GZY6 243 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 PRDM7Q9NQW5 492 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 CYSLTR2Q9NS75 346 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 NXT1Q9UKK6 140 aaKnown RBP17.67■□□□□ 0.42
TSR1-201ENST00000301364 TRBV5-3A0A0A0MS03 114 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 A0A1B0GUH1 482 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 PLRG1O43660 514 aaKnown RBP17.67■□□□□ 0.42
TSR1-201ENST00000301364 APOBEC1P41238 236 aaKnown RBP17.67■□□□□ 0.42
TSR1-201ENST00000301364 TMEM201Q5SNT2 666 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 AGBL4Q5VU57 503 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 SLC16A14Q7RTX9 510 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 CGGBP1Q9UFW8 167 aaPredicted RBP17.67■□□□□ 0.42
TSR1-201ENST00000301364 KLF15Q9UIH9 416 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 FOCADQ5VW36 1801 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 A0A1B0GX78 115 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 SNRPGP15A8MWD9 76 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 CD160O95971 181 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 CSNK1EP49674 416 aaKnown RBP17.67■□□□□ 0.42
TSR1-201ENST00000301364 HMGN3Q15651 99 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 ANGPTL5Q86XS5 388 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 GPR32P1Q8NGA4 272 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 POFUT1Q9H488 388 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 TMEM184BQ9Y519 407 aaPredicted RBP17.67■□□□□ 0.42
TSR1-201ENST00000301364 TRAPPC2LH3BP13 241 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 EPXP11678 715 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 AGERQ15109 404 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 OR5L1Q8NGL2 311 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 QPCTLQ9NXS2 382 aa17.67■□□□□ 0.42
TSR1-201ENST00000301364 KIAA0100Q14667 2235 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 GDF1P27539 372 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 ALDH3B1P43353 468 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 HTR5AP47898 357 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 RFX2P48378 723 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms