RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 DOCK11Q5JSL3 2073 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 TRAV20A0A0B4J274 112 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 LYPD3O95274 346 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 THY1P04216 161 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 ADMP35318 185 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 ARFIP2P53365 341 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 HILS1P60008 231 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 FADDQ13158 208 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 NPTX1Q15818 432 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 TSTQ16762 297 aaKnown RBP7.9□□□□□ -1.14
CNOT9-202ENST00000295701 SPRNQ5BIV9 151 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 TMEM255AQ5JRV8 349 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 ACSM5Q6NUN0 579 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 USP51Q70EK9 711 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 SLC35D2Q76EJ3 337 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 TSPYL5Q86VY4 417 aaPredicted RBP7.9□□□□□ -1.14
CNOT9-202ENST00000295701 RBM45Q8IUH3 476 aaKnown RBP7.9□□□□□ -1.14
CNOT9-202ENST00000295701 ZDHHC22Q8N966 263 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 SCAIQ8N9R8 606 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 ICA1LQ8NDH6 482 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 SLC30A7Q8NEW0 376 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 OR4D11Q8NGI4 311 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 OR5J2Q8NH18 312 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 OR6S1Q8NH40 331 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 SYNPRQ8TBG9 265 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 CITED4Q96RK1 184 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 MCHR1Q99705 422 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 ZNF416Q9BWM5 594 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 RAD21L1Q9H4I0 556 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 ZNF385DQ9H6B1 395 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 RNF121Q9H920 327 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 NPHS2Q9NP85 383 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 SLC52A3Q9NQ40 469 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 HINT3Q9NQE9 182 aaKnown RBP7.9□□□□□ -1.14
CNOT9-202ENST00000295701 TMEM38BQ9NVV0 291 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 TAS2R5Q9NYW4 299 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 SELENONQ9NZV5 590 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 TESQ9UGI8 421 aaKnown RBP7.9□□□□□ -1.14
CNOT9-202ENST00000295701 SLC7A8Q9UHI5 535 aa7.9□□□□□ -1.14
CNOT9-202ENST00000295701 IGLV3-9A0A075B6K5 115 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 CPSF4LA6NMK7 179 aaKnown RBP7.89□□□□□ -1.15
CNOT9-202ENST00000295701 TRIM77I1YAP6 450 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 DHHO43323 396 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 MFN2O95140 757 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 CH25HO95992 272 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 IGHV2-5P01817 119 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 OPN1SWP03999 348 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 LCKP06239 509 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 QDPRP09417 244 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 OR8G3PP0DMU2 310 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF250P15622 560 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 MAKP20794 623 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 CRYBB2P43320 205 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 NCALDP61601 193 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 RPS23P62266 143 aaKnown RBP7.89□□□□□ -1.15
CNOT9-202ENST00000295701 MRPS11P82912 194 aaKnown RBP7.89□□□□□ -1.15
CNOT9-202ENST00000295701 RBBP4Q09028 425 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 SCARB2Q14108 478 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 DUSP7Q16829 419 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 AWAT1Q58HT5 328 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 LRIF1Q5T3J3 769 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 REP15Q6BDI9 236 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 TMEM154Q6P9G4 183 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 USP43Q70EL4 1123 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 PIWIL3Q7Z3Z3 882 aaKnown RBP7.89□□□□□ -1.15
CNOT9-202ENST00000295701 GPR32P1Q8NGA4 272 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 OR4K5Q8NGD3 323 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 OR6T1Q8NGN1 323 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 OR6X1Q8NH79 312 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF347Q96SE7 839 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 EPYCQ99645 322 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 TMEM43Q9BTV4 400 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 DENND2DQ9H6A0 471 aaPredicted RBP7.89□□□□□ -1.15
CNOT9-202ENST00000295701 CDH20Q9HBT6 801 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 OPN4Q9UHM6 478 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF346Q9UL40 294 aaKnown RBP7.89□□□□□ -1.15
CNOT9-202ENST00000295701 WIPI2Q9Y4P8 454 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 PPIAL4AQ9Y536 164 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 PCDHGB1Q9Y5G3 927 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 USH1CQ9Y6N9 552 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 TANC2Q9HCD6 1990 aa7.89□□□□□ -1.15
CNOT9-202ENST00000295701 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 TRBV5-3A0A0A0MS03 114 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 IGHV1-69-2A0A0G2JMI3 117 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 KPNA4O00629 521 aaPredicted RBP7.88□□□□□ -1.15
CNOT9-202ENST00000295701 TPD52L2O43399 206 aaKnown RBP7.88□□□□□ -1.15
CNOT9-202ENST00000295701 RNF13O43567 381 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 SPRY3O43610 288 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 RAB6AP20340 208 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 LSP1P33241 339 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 MPV17P39210 176 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 UCP2P55851 309 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 KLF3P57682 345 aaPredicted RBP7.88□□□□□ -1.15
CNOT9-202ENST00000295701 ZP4Q12836 540 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 SELPLGQ14242 412 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF74Q16587 644 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 ENTPD8Q5MY95 495 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 SPATA46Q5T0L3 261 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 LCE3BQ5TA77 95 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 EPGNQ6UW88 154 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms