RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 KDM8Q8N371 416 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 Q8N402 240 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 RPS4Y2Q8TD47 263 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 ASB17Q8WXJ9 295 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 NSMAFQ92636 917 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 ZBTB8AQ96BR9 441 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 SGCZQ96LD1 299 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 NEURL2Q9BR09 285 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 MFRPQ9BY79 579 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 FBXL2Q9UKC9 423 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 TBC1D24Q9ULP9 559 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 KLHDC2Q9Y2U9 406 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 KIAA1549Q9HCM3 1950 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 LIPT2A6NK58 231 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 PRR32B1ATL7 298 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 SHISA8B8ZZ34 492 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 STMND1H3BQB6 276 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 UPK3AO75631 287 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 ZFPL1O95159 310 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 CSF3P09919 207 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 CCL3P10147 92 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 MAPK3P27361 379 aaPredicted RBP8.2□□□□□ -1.1
PDPN-201ENST00000294489 NANOS3P60323 173 aaKnown RBP8.2□□□□□ -1.1
PDPN-201ENST00000294489 SLC18B1Q6NT16 456 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 UNQ9370/PRO34162Q6UXP9 181 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 ZNF227Q86WZ6 799 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 PLCZ1Q86YW0 608 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 C19orf18Q8NEA5 215 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 DEFB124Q8NES8 71 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 OR5AK2Q8NH90 309 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 IP6K3Q96PC2 410 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 SOSTQ9BQB4 213 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 TSPAN10Q9H1Z9 355 aaPredicted RBP8.2□□□□□ -1.1
PDPN-201ENST00000294489 PPP1R3EQ9H7J1 279 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 EXTL2Q9UBQ6 330 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 MALT1Q9UDY8 824 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 PCNX2A6NKB5 2137 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 IGLV1-36A0A0B4J1U3 117 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 PROB1E7EW31 1015 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 PDCD5O14737 125 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 IMPDH2P12268 514 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 HLA-DOBP13765 273 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 LIFP15018 202 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 IFNGR1P15260 489 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 CTLA4P16410 223 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 ELK1P19419 428 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 APEX1P27695 318 aaKnown RBP8.2□□□□□ -1.1
PDPN-201ENST00000294489 HSF1Q00613 529 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 POU3F1Q03052 451 aaPredicted RBP8.2□□□□□ -1.1
PDPN-201ENST00000294489 TAB1Q15750 504 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 PRAMEF20Q5VT98 475 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 SLC22A10Q63ZE4 541 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 SLC35D2Q76EJ3 337 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 TMEM156Q8N614 296 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 SAMD12Q8N8I0 201 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 SLC25A43Q8WUT9 341 aaPredicted RBP8.2□□□□□ -1.1
PDPN-201ENST00000294489 NKD1Q969G9 470 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 UBL7Q96S82 380 aaPredicted RBP8.2□□□□□ -1.1
PDPN-201ENST00000294489 COMMD4Q9H0A8 199 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 NOX4Q9NPH5 578 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 ABRACLQ9P1F3 81 aa8.2□□□□□ -1.1
PDPN-201ENST00000294489 A0A0G2JK05 382 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 LINC00854A0A1B0GVQ3 168 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 A0A1W2PNV4 684 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 ZNF432O94892 652 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 ABHD16AO95870 558 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 GPANK1O95872 356 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 SPARCP09486 303 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 SRMP19623 302 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 RPS27P42677 84 aaKnown RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 ADAM8P78325 824 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 RASGEF1BQ0VAM2 473 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 MYBPHQ13203 477 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 MADCAM1Q13477 382 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 ASAH1Q13510 395 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 RIN1Q13671 783 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 INPP5JQ15735 1006 aaPredicted RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 ZNF468Q5VIY5 522 aaPredicted RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 KCTD18Q6PI47 426 aaPredicted RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 RAB43Q86YS6 212 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 GTPBP8Q8N3Z3 284 aaPredicted RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 TRMT10AQ8TBZ6 339 aaKnown RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 ASB10Q8WXI3 467 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 SMAD5Q99717 465 aaKnown RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 SLC22A4Q9H015 551 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 CYSLTR2Q9NS75 346 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 RABL2AQ9UBK7 228 aaPredicted RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 KCNG2Q9UJ96 466 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 RPH3AQ9Y2J0 694 aaPredicted RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 MRPS18CQ9Y3D5 142 aaKnown RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 NCKAP5O14513 1909 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 OTOGLQ3ZCN5 2332 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 MASP2O00187 686 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 SEC14L5O43304 696 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 EPXP11678 715 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 SPNP16150 400 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 ZNF17P17021 662 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 TCEA1P23193 301 aaKnown RBP8.19□□□□□ -1.1
PDPN-201ENST00000294489 THBS2P35442 1172 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms