RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TMEM72A0PK05 275 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 BLACEA4D250 179 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 A6NL46 340 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 LMO7DNF2Z398 122 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 PRICKLE3O43900 615 aaPredicted RBP10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 SPI1P17947 270 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 GABRR1P24046 479 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 FZD2Q14332 565 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 TRIP6Q15654 476 aaKnown RBP10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 PEAR1Q5VY43 1037 aaPredicted RBP10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 DLEU7Q6UYE1 221 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 KCNG3Q8TAE7 436 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF578Q96N58 590 aaPredicted RBP10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 TMEM59Q9BXS4 323 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 GABARAPL1Q9H0R8 117 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 A0A0J9YY10 115 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 A0A1W2PR77 199 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 D6RAR5 112 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 P04436 131 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 CRMP1Q14194 572 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 B3GLCTQ6Y288 498 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLCO4C1Q6ZQN7 724 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF808Q8N4W9 903 aaPredicted RBP10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 C10orf90Q96M02 699 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 NIT2Q9NQR4 276 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 BRCA2P51587 3418 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 GABARAPH6UMI1 98 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 SCGB1D1O95968 90 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 ATP1B3P54709 279 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF266Q14584 549 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 EBPQ15125 230 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR10K2Q6IF99 312 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 MDGA2Q7Z553 956 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 MKXQ8IYA7 352 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 LFNGQ8NES3 379 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR10R2Q8NGX6 335 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR1E3Q8WZA6 343 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 YIPF5Q969M3 257 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 UPRTQ96BW1 309 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 CMSS1Q9BQ75 279 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 KATNB1Q9BVA0 655 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 TUBB1Q9H4B7 451 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLC22A11Q9NSA0 550 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 CLEC2DQ9UHP7 191 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 SEC14L5O43304 696 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 MSR1P21757 451 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 CSNK1A1P48729 337 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 ACY1Q03154 408 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 ECH1Q13011 328 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 DHRS4L2Q6PKH6 230 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR52E1Q8NGJ3 308 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 RAB3CQ96E17 227 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 SEC22CQ9BRL7 303 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 MED20Q9H944 212 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 SERTAD4Q9NUC0 356 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 RARRES3Q9UL19 164 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 CBLCQ9ULV8 474 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 LOC102725191A0A1B0GVB3 256 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 TUBAL3A6NHL2 446 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR52A4PA6NMU1 304 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 H3BML4 177 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 NUDT21O43809 227 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 ADRB1P08588 477 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 UBE2NP61088 152 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 RPE65Q16518 533 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 PLA2G2CQ5R387 149 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 DPY19L4Q7Z388 723 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 FAM26EQ8N5C1 309 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR6M1Q8NGM8 313 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 TMEM43Q9BTV4 400 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 NKX6-2Q9C056 277 aaPredicted RBP10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 FGF22Q9HCT0 170 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 LRIT2A6NDA9 550 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 SIX6O95475 246 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 IMPA1P29218 277 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 FOXK2Q01167 660 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 CTBSQ01459 385 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 CTU2Q2VPK5 515 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 DEFB110Q30KQ9 67 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 DHRS9Q9BPW9 319 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 CXorf36Q9H7Y0 433 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 TAAR2Q9P1P5 351 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 GNG13Q9P2W3 67 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 PLEKHM1Q9Y4G2 1056 aa10.87□□□□□ -0.67
SYNGAP1-201ENST00000293748 A0A087WZY1 265 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 SOCS6O14544 535 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF780AO75290 641 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 AIFM1O95831 613 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 HBQ1P09105 142 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 TACR3P29371 465 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 RPS18P62269 152 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR7A5Q15622 319 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF74Q16587 644 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR5B2Q96R09 309 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 MBOAT4Q96T53 435 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 ISYNA1Q9NPH2 558 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 AKIP1Q9NQ31 210 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF629Q9UEG4 869 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLC17A4Q9Y2C5 497 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms