RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CLPTM1O96005 669 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 MMP7P09237 267 aaPredicted RBP21.62■■□□□ 1.05
U2AF1-201ENST00000291552 FAM157BP0CG42 384 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 COL8A2P25067 703 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 ARFIP2P53365 341 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 CDH15P55291 814 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 ERVS71-1P61550 626 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 CCNIQ14094 377 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 MMEL1Q495T6 779 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 CYBRD1Q53TN4 286 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 C10orf128Q5T292 105 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 ERICH5Q6P6B1 374 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 SLC16A14Q7RTX9 510 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 LIPHQ8WWY8 451 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 TSPAN32Q96QS1 320 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 MS4A5Q9H3V2 200 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 INIPQ9NRY2 104 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 UGT2A1Q9Y4X1 527 aa21.62■■□□□ 1.05
U2AF1-201ENST00000291552 IGKV1D-43A0A0B4J1Z2 117 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 MCIDASD6RGH6 385 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 SLC2A10O95528 541 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 NPPAP01160 153 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 TROVE2P10155 538 aaKnown RBP eCLIP21.61■■□□□ 1.05
U2AF1-201ENST00000291552 NAT2P11245 290 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 ACADSP16219 412 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 LSP1P33241 339 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 NRN1LQ496H8 165 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 LRRC23Q53EV4 343 aaPredicted RBP21.61■■□□□ 1.05
U2AF1-201ENST00000291552 TMEM53Q6P2H8 277 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 LINC01356Q8N9X3 169 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 OR51B6Q9H340 312 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 DUSP13Q9UII6 198 aa21.61■■□□□ 1.05
U2AF1-201ENST00000291552 LOC100653049A0A140TA62 436 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 CENPBD1B2RD01 187 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 WNT9BO14905 357 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 ENTPD5O75356 428 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 KRT34O76011 436 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 HNF1AP20823 631 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 KDELR2P33947 212 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 FMODQ06828 376 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 ALKBH6Q3KRA9 238 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 RGS7BPQ6MZT1 257 aaPredicted RBP21.6■■□□□ 1.05
U2AF1-201ENST00000291552 HDAC2Q92769 488 aaKnown RBP21.6■■□□□ 1.05
U2AF1-201ENST00000291552 NABP1Q96AH0 204 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 RACGAP1Q9H0H5 632 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 RNF121Q9H920 327 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 CDH20Q9HBT6 801 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 A4GNTQ9UNA3 340 aa21.6■■□□□ 1.05
U2AF1-201ENST00000291552 IGLV3-9A0A075B6K5 115 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 A0A1W2PPW3 197 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 RP2O75695 350 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 SNAP29O95721 258 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 THRBP10828 461 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 ZNF250P15622 560 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 CDAP32320 146 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 DAP3P51398 398 aaKnown RBP21.59■■□□□ 1.05
U2AF1-201ENST00000291552 ZNF84P51523 738 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 LAPTM4AQ15012 233 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 SLC36A2Q495M3 483 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 DPPA2Q7Z7J5 298 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 CLDND2Q8NHS1 167 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 RDH5Q92781 318 aa21.59■■□□□ 1.05
U2AF1-201ENST00000291552 NPIPB13A6NJU9 1138 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 NPIPB4C9JG80 1138 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 ACHEP22303 614 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 MAGEB1P43366 347 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 MAPRE2Q15555 327 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 MICU2Q8IYU8 434 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 LRRC18Q8N456 261 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 RBM15BQ8NDT2 890 aaKnown RBP21.58■■□□□ 1.05
U2AF1-201ENST00000291552 CPEB3Q8NE35 698 aaKnown RBP21.58■■□□□ 1.05
U2AF1-201ENST00000291552 OR2T12Q8NG77 320 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 GTF3AQ92664 365 aaKnown RBP21.58■■□□□ 1.05
U2AF1-201ENST00000291552 C1orf198Q9H425 327 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 NARFLQ9H6Q4 476 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 ZNF275Q9NSD4 429 aaPredicted RBP21.58■■□□□ 1.05
U2AF1-201ENST00000291552 MAN2C1Q9NTJ4 1040 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 MRGBPQ9NV56 204 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 CMTM6Q9NX76 183 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 TAAR3PQ9P1P4 343 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 ZNF346Q9UL40 294 aaKnown RBP21.58■■□□□ 1.05
U2AF1-201ENST00000291552 HIF3AQ9Y2N7 669 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 MED31Q9Y3C7 131 aa21.58■■□□□ 1.05
U2AF1-201ENST00000291552 MGRN1O60291 552 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 IFNA14P01570 189 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 GPR6P46095 362 aaPredicted RBP21.57■■□□□ 1.04
U2AF1-201ENST00000291552 MRPS34P82930 218 aaKnown RBP21.57■■□□□ 1.04
U2AF1-201ENST00000291552 TBC1D28Q2M2D7 210 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 PABPC1L2AQ5JQF8 200 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 HDDC2Q7Z4H3 204 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 POU5F2Q8N7G0 328 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 RCN3Q96D15 328 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 TPD52L3Q96J77 140 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 PRRC1Q96M27 445 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 TXNIPQ9H3M7 391 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 ARMCX1Q9P291 453 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 SNX13Q9Y5W8 968 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 CAPN7Q9Y6W3 813 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 WNK2Q9Y3S1 2297 aa21.57■■□□□ 1.04
U2AF1-201ENST00000291552 TANC2Q9HCD6 1990 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms