RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PGA3P0DJD8 388 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 RAB6AP20340 208 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 HSD3B2P26439 372 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 NPY4RP50391 375 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 SMIM11AP58511 58 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 TAS2R20P59543 309 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 LMAN2Q12907 356 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 ELOBQ15370 118 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 KCTD9Q7L273 389 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 GID4Q8IVV7 300 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 GALNT16Q8N428 558 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 ZBTB2Q8N680 514 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 CLDN19Q8N6F1 224 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 MORN4Q8NDC4 146 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 ADPRHL1Q8NDY3 354 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 CD300LFQ8TDQ1 290 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 FRZBQ92765 325 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 PSMG2Q969U7 264 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 RRNAD1Q96FB5 475 aaKnown RBP8.4□□□□□ -1.07
PDGFC-201ENST00000274071 FCRL2Q96LA5 508 aaPredicted RBP8.4□□□□□ -1.07
PDGFC-201ENST00000274071 OR14A2Q96R54 314 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 OR2AG1Q9H205 316 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 SRMSQ9H3Y6 488 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 OR2S2Q9NQN1 319 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 GPR173Q9NS66 373 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 SEMA4GQ9NTN9 838 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 GNG8Q9UK08 70 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 SCML2Q9UQR0 700 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF727A8MUV8 499 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 TSPAN2O60636 221 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 PRAMEF4O60810 478 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 DUSP11O75319 330 aaKnown RBP8.39□□□□□ -1.07
PDGFC-201ENST00000274071 TGFB1P01137 390 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 ITGB2P05107 769 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 MMP7P09237 267 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-201ENST00000274071 OR4A8P0C604 315 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 KCNE1P15382 129 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 ITPKBP27987 946 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 CD34P28906 385 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 MC4RP32245 332 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 BRS3P32247 399 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 RPL29P47914 159 aaKnown RBP8.39□□□□□ -1.07
PDGFC-201ENST00000274071 PPM1FP49593 454 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-201ENST00000274071 SLC37A1P57057 533 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 SP3Q02447 781 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 DHRS2Q13268 280 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 ZXDCQ2QGD7 858 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-201ENST00000274071 MOGAT2Q3SYC2 334 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF385BQ569K4 471 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 PRAMEF9Q5VWM5 478 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 FRG2Q64ET8 278 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 PWWP2BQ6NUJ5 590 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 REEP3Q6NUK4 255 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 TEX38Q6PEX7 206 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 KIRREL2Q6UWL6 708 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 APCDD1Q8J025 514 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 OR52N4Q8NGI2 321 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 OR4K15Q8NH41 348 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 UBTD2Q8WUN7 234 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 HMCESQ96FZ2 354 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 TMEM169Q96HH4 297 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 FRG2BQ96QU4 278 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 GFI1Q99684 422 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 GPR62Q9BZJ7 368 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 CIPCQ9C0C6 399 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 MYOTQ9UBF9 498 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 MTFP1Q9UDX5 166 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 AMDHD2Q9Y303 409 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 COLEC10Q9Y6Z7 277 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 MGAT4DA6NG13 374 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 IFITM5A6NNB3 132 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 MT-ND5P03915 603 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 ANXA5P08758 320 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 EPCAMP16422 314 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 MAOAP21397 527 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 NT5EP21589 574 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 HOXC8P31273 242 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 SUCLG1P53597 346 aaKnown RBP8.39□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF585AQ6P3V2 769 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 CXCL17Q6UXB2 119 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 OVCH1Q7RTY7 1134 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 CPOQ8IVL8 374 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 OR1J2Q8NGS2 313 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 HAVCR1Q96D42 359 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 NDC1Q9BTX1 674 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 SCRT1Q9BWW7 348 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 SLC32A1Q9H598 525 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 KCNG2Q9UJ96 466 aa8.39□□□□□ -1.07
PDGFC-201ENST00000274071 NOP16Q9Y3C1 178 aaKnown RBP8.39□□□□□ -1.07
PDGFC-201ENST00000274071 PDCD11Q14690 1871 aaKnown RBP8.38□□□□□ -1.07
PDGFC-201ENST00000274071 A0A1W2PN81 502 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 J3QLW9 94 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 AMBPP02760 352 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 RPN2P04844 631 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF19P17023 458 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 GSTM3P21266 225 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 GABRR1P24046 479 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 CHRNA7P36544 502 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 PNPLA4P41247 253 aa8.38□□□□□ -1.07
PDGFC-201ENST00000274071 TAF6P49848 677 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms