RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 CDKN2CP42773 168 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 MVDP53602 400 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 SLC18A1P54219 525 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 MAGOHP61326 146 aaKnown RBP8.34□□□□□ -1.07
LRTM1-201ENST00000273286 BST1Q10588 318 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 BNIP2Q12982 314 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 FADDQ13158 208 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 C1DQ13901 141 aaKnown RBP8.34□□□□□ -1.07
LRTM1-201ENST00000273286 PDCD1Q15116 288 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 C6orf89Q6UWU4 347 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 VRK2Q86Y07 508 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 LSMEM1Q8N8F7 131 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 ADPRHL1Q8NDY3 354 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 PNPT1Q8TCS8 783 aaKnown RBP8.34□□□□□ -1.07
LRTM1-201ENST00000273286 DNAJA4Q8WW22 397 aaPredicted RBP8.34□□□□□ -1.07
LRTM1-201ENST00000273286 TFAP2CQ92754 450 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 SLC38A4Q969I6 547 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 TLCD1Q96CP7 247 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 ITCHQ96J02 903 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 EVA1AQ9H8M9 152 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 TPT1P8Q9HAU6 139 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 BCL2L10Q9HD36 194 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 KCNK9Q9NPC2 374 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 ZNF446Q9NWS9 450 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 ZIM2Q9NZV7 527 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 FBXL3Q9UKT7 428 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 USP22Q9UPT9 525 aa8.34□□□□□ -1.07
LRTM1-201ENST00000273286 ZNF99A8MXY4 864 aaPredicted RBP8.33□□□□□ -1.08
LRTM1-201ENST00000273286 DIRC3C9JPN6 131 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 SDHDO14521 159 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 UPK3AO75631 287 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 ZNF432O94892 652 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 ETFAP13804 333 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 ETS2P15036 469 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 BGNP21810 368 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 EPHA3P29320 983 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 IL12AP29459 219 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 RPS5P46782 204 aaKnown RBP8.33□□□□□ -1.08
LRTM1-201ENST00000273286 NME5P56597 212 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 CLDN17P56750 224 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 RPS23P62266 143 aaKnown RBP8.33□□□□□ -1.08
LRTM1-201ENST00000273286 DAG1Q14118 895 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 MAPK11Q15759 364 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 BEAN1Q3B7T3 259 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 ZNF311Q5JNZ3 666 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 HHATQ5VTY9 493 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 ATG16L1Q676U5 607 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 H1FNTQ75WM6 255 aaPredicted RBP8.33□□□□□ -1.08
LRTM1-201ENST00000273286 SPATA21Q7Z572 469 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 TEX29Q8N6K0 151 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 OR6S1Q8NH40 331 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 BBS10Q8TAM1 723 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 ZFAND2BQ8WV99 257 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 SLC25A36Q96CQ1 311 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 TMEM19Q96HH6 336 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 LRR1Q96L50 414 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 EPYCQ99645 322 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 DOK1Q99704 481 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 SPATA5L1Q9BVQ7 753 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 TOR3AQ9H497 397 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 CRLF2Q9HC73 371 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 B3GAT2Q9NPZ5 323 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 SDR39U1Q9NRG7 319 aaPredicted RBP8.33□□□□□ -1.08
LRTM1-201ENST00000273286 CMAHPQ9Y471 501 aa8.33□□□□□ -1.08
LRTM1-201ENST00000273286 ANK2Q01484 3957 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 IGHV2OR16-5A0A0B4J2B6 119 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 TMEM120BA0PK00 339 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 B4DSR2 109 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 C5orf58C9J3I9 102 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 M0R233 179 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 SYNGR3O43761 229 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 GASTP01350 101 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 VIMP08670 466 aaKnown RBP8.32□□□□□ -1.08
LRTM1-201ENST00000273286 CALCRP30988 508 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 PRKAR1BP31321 381 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 THBS4P35443 961 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 SRP14P37108 136 aaKnown RBP8.32□□□□□ -1.08
LRTM1-201ENST00000273286 DVL1P1P54792 670 aaPredicted RBP8.32□□□□□ -1.08
LRTM1-201ENST00000273286 CDH15P55291 814 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 ARF1P84077 181 aaKnown RBP8.32□□□□□ -1.08
LRTM1-201ENST00000273286 SNTB2Q13425 540 aaKnown RBP8.32□□□□□ -1.08
LRTM1-201ENST00000273286 RGNQ15493 299 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 ADRM1Q16186 407 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 CEACAM16Q2WEN9 425 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 SLC9B1Q4ZJI4 515 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 C6orf10Q5SRN2 563 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 FAM91A1Q658Y4 838 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 ULK3Q6PHR2 472 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 DEF8Q6ZN54 512 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 LINGO2Q7L985 606 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 SERPINA11Q86U17 422 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 CLIP4Q8N3C7 705 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 SVOPLQ8N434 492 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 CKAP2Q8WWK9 683 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 MAELQ96JY0 434 aaKnown RBP8.32□□□□□ -1.08
LRTM1-201ENST00000273286 PTDSS2Q9BVG9 487 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 NOX3Q9HBY0 568 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 GPR35Q9HC97 309 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 A4GALTQ9NPC4 353 aa8.32□□□□□ -1.08
LRTM1-201ENST00000273286 PNPOQ9NVS9 261 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms