RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 MRPL13Q9BYD1 178 aaKnown RBP7.62□□□□□ -1.19
TPM3-201ENST00000271850 MS4A5Q9H3V2 200 aa7.62□□□□□ -1.19
TPM3-201ENST00000271850 TMEM27Q9HBJ8 222 aa7.62□□□□□ -1.19
TPM3-201ENST00000271850 TAAR3PQ9P1P4 343 aa7.62□□□□□ -1.19
TPM3-201ENST00000271850 OPN4Q9UHM6 478 aa7.62□□□□□ -1.19
TPM3-201ENST00000271850 DUSP13Q9UII6 198 aa7.62□□□□□ -1.19
TPM3-201ENST00000271850 UGT2A1Q9Y4X1 527 aa7.62□□□□□ -1.19
TPM3-201ENST00000271850 TMEM89A2RUT3 159 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 ZNF726A6NNF4 738 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 M0QX08 132 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 KPNA4O00629 521 aaPredicted RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 DHHO43323 396 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 PPIHO43447 177 aaKnown RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 KCNAB3O43448 404 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 PLPP2O43688 288 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 MGRN1O60291 552 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 CDC14BO60729 498 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 MT-ATP6P00846 226 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 TFP02787 698 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 ERCC1P07992 297 aaPredicted RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 TSPAN19P0C672 248 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 ADRA2CP18825 462 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 SLC6A2P23975 617 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 WNT5AP41221 380 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 ZNF133P52736 654 aaPredicted RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 TMEM33P57088 247 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 HILS1P60008 231 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 CCL8P80075 99 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 MYBPC1Q00872 1141 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 GLO1Q04760 184 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 AGKQ53H12 422 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 GKAP1Q5VSY0 366 aaPredicted RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 RGS7BPQ6MZT1 257 aaPredicted RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 PIWIL3Q7Z3Z3 882 aaKnown RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 ZNF101Q8IZC7 436 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 PFN4Q8NHR9 129 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 ADAMTS16Q8TE57 1224 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 ZFAND2BQ8WV99 257 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 MCHR2Q969V1 340 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 SLC25A44Q96H78 314 aaPredicted RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 CCDC28BQ9BUN5 200 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 SPATA5L1Q9BVQ7 753 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 PCDHAC1Q9H158 963 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 DENND2DQ9H6A0 471 aaPredicted RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 ZNF665Q9H7R5 613 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 CACYBPQ9HB71 228 aaKnown RBP7.61□□□□□ -1.19
TPM3-201ENST00000271850 B3GAT2Q9NPZ5 323 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 C20orf141Q9NUB4 165 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 DCAF16Q9NXF7 216 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 SLC7A7Q9UM01 511 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 TRIM33Q9UPN9 1127 aa7.61□□□□□ -1.19
TPM3-201ENST00000271850 PRKDCP78527 4128 aaKnown RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 LOC100509620A0A075B734 347 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 A0A1W2PPW3 197 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 PRORSD1PA6NEY8 169 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 VSTM5A8MXK1 200 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 POLR3GO15318 223 aaPredicted RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 TGDSO95455 350 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 SLC2A10O95528 541 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 SNAP29O95721 258 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 PNPP00491 289 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 IGHV2-5P01817 119 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 F13BP05160 661 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 QDPRP09417 244 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 OR8G3PP0DMU2 310 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 FUT1P19526 365 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 TNFRSF1BP20333 461 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 MAKP20794 623 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 EPHA1P21709 976 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 CDAP32320 146 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 MPV17P39210 176 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 CRYBB2P43320 205 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 ATP4BP51164 291 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 MMP15P51511 669 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 UGT2B15P54855 530 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 NCALDP61601 193 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 RPS23P62266 143 aaKnown RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 GALK2Q01415 458 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 MVKQ03426 396 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 FMODQ06828 376 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 RPL18Q07020 188 aaKnown RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 TTMPQ5BVD1 217 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 C12orf54Q6X4T0 127 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 DHDDSQ86SQ9 333 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 PEG10Q86TG7 708 aaKnown RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 RANBP3LQ86VV4 465 aaPredicted RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 KRT73Q86Y46 540 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 NKAIN4Q8IVV8 208 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 DPP10Q8N608 796 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 C10orf53Q8N6V4 93 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 CLDN22Q8N7P3 220 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 ZDHHC22Q8N966 263 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 NOXO1Q8NFA2 376 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 OR51F2Q8NH61 342 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 VANGL1Q8TAA9 524 aaPredicted RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 ASB10Q8WXI3 467 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 ZNF566Q969W8 418 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 ZNF607Q96SK3 696 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 CGREF1Q99674 301 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 KAT8Q9H7Z6 458 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms