RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ACSM3Q53FZ2 586 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 ZNF789Q5FWF6 425 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 SBSNQ6UWP8 590 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 OR10A5Q9H207 317 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 OR10A2Q9H208 303 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 UBQLN4Q9NRR5 601 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 TMEM200CA6NKL6 621 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 TRAF3IP2O43734 574 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 OR13C7P0DN81 318 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 APEHP13798 732 aaKnown RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 IGFBP4P22692 258 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 ELOCQ15369 112 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 C2orf76Q3KRA6 126 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 PRAMEF8Q5VWM4 474 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 PRAMEF7Q5VXH5 474 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 MZB1Q8WU39 189 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 MITD1Q8WV92 249 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 ASB17Q8WXJ9 295 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 SHARPINQ9H0F6 387 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 TMEM100Q9NV29 134 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 A6NLC8 198 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 GPR39O43194 453 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 PMP2P02689 132 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 SERPINE2P07093 398 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 HIST1H1TP22492 207 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 FOXA1P55317 472 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 SOX4Q06945 474 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 EIF2B1Q14232 305 aaKnown RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 TAF9Q16594 264 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 WBP2NLQ6ICG8 309 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 CPPED1Q9BRF8 314 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 CDCA4Q9BXL8 241 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 NXF2Q9GZY0 626 aaKnown RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 RLIMQ9NVW2 624 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 NFKBIEO00221 500 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 HOXA11P31270 313 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 GPR157Q5UAW9 335 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 ZNF738Q8NE65 137 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 OR9A4Q8NGU2 314 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 MBOAT4Q96T53 435 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 ADAM19Q9H013 955 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 LSM5Q9Y4Y9 91 aaKnown RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 USP54Q70EL1 1684 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 ANTXRLA6NF34 631 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 GJB5O95377 273 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 OPRD1P41143 372 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 SIM1P81133 766 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 FBXO46Q6PJ61 603 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 MAML2Q8IZL2 1156 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 RCBTB1Q8NDN9 531 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 OR6T1Q8NGN1 323 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 BRI3BPQ8WY22 251 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 LYSMD1Q96S90 227 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 SLC25A21Q9BQT8 299 aaPredicted RBP5.28□□□□□ -1.56
VCAN-201ENST00000265077 SLC7A7Q9UM01 511 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 ZNF320A2RRD8 509 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 LRP5LA4QPB2 252 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 ZNF860A6NHJ4 632 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 HTR1FP30939 366 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 HOXC13P31276 330 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 SKP2Q13309 424 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 PCK2Q16822 640 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 TMEM244Q5VVB8 128 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 OR7E24Q6IFN5 339 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 OR2D3Q8NGH3 330 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 MIB2Q96AX9 1013 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 DTD2Q96FN9 168 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 OR1F2PQ96R84 312 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 PLEKHA3Q9HB20 300 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 PADI1Q9ULC6 663 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 MYO9AB2RTY4 2548 aa5.28□□□□□ -1.56
VCAN-201ENST00000265077 PRICKLE3O43900 615 aaPredicted RBP5.27□□□□□ -1.57
VCAN-201ENST00000265077 AKR7A3O95154 331 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 SNAI1O95863 264 aaPredicted RBP5.27□□□□□ -1.57
VCAN-201ENST00000265077 APOA2P02652 100 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 ARAFP10398 606 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 CAV2P51636 162 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 LCN6P62502 163 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 TBPL2Q6SJ96 375 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 NLGN4XQ8N0W4 816 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 OR9A2Q8NGT5 310 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 CPEB1Q9BZB8 566 aaKnown RBP5.27□□□□□ -1.57
VCAN-201ENST00000265077 MBTPS2O43462 519 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 KLF8O95600 359 aaPredicted RBP5.27□□□□□ -1.57
VCAN-201ENST00000265077 FUT1P19526 365 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 S100A7P31151 101 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 RFX2P48378 723 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 FHITP49789 147 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 HYAL4Q2M3T9 481 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 RPS26P11Q5JNZ5 115 aaPredicted RBP5.27□□□□□ -1.57
VCAN-201ENST00000265077 KDM4DQ6B0I6 523 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 OR2A2Q6IF42 318 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 IL20RBQ6UXL0 311 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 MEPCEQ7L2J0 689 aaKnown RBP5.27□□□□□ -1.57
VCAN-201ENST00000265077 ZMYND19Q96E35 227 aaPredicted RBP5.27□□□□□ -1.57
VCAN-201ENST00000265077 NEURL3Q96EH8 262 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 OR5M11Q96RB7 305 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 SEC11CQ9BY50 192 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 HAPLN2Q9GZV7 340 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 SCN7AQ01118 1682 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms