RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 TSPAN31Q12999 210 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF704Q6ZNC4 412 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 MDP1Q86V88 176 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 ARIH2OSQ8N7S6 290 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 ICA1LQ8NDH6 482 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 GIPC3Q8TF64 312 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 HSD17B8Q92506 261 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 BCL2L2Q92843 193 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 TMEM54Q969K7 222 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 RADILQ96JH8 1075 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 ADAD1Q96M93 576 aaKnown RBP6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 NMNAT3Q96T66 252 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 MRPL13Q9BYD1 178 aaKnown RBP6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 MMADHCQ9H3L0 296 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 NTN4Q9HB63 628 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 ITGB1BP2Q9UKP3 347 aa6.33□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR6C65A6NJZ3 312 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SAC3D1A6NKF1 404 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 DCTN6O00399 190 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 DEAF1O75398 565 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 CCL2P13500 99 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 HIST1H1CP16403 213 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SDHAP31040 664 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 PTDSS1P48651 473 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 CENPAP49450 140 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 HMGA2P52926 109 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SGCAQ16586 387 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 LEG1Q6P5S2 330 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 ANKRD16Q6P6B7 361 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC22A25Q6T423 547 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 ATG16L2Q8NAA4 619 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR52L1Q8NGH7 329 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR51L1Q8NGJ5 315 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 GNPDA2Q8TDQ7 276 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR51B6Q9H340 312 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC24A3Q9HC58 644 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 EMC7Q9NPA0 242 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 NRIP3Q9NQ35 241 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 TMEM38BQ9NVV0 291 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF224Q9NZL3 707 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 KIF17Q9P2E2 1029 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 DNAJB9Q9UBS3 223 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 POU2F3Q9UKI9 436 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 MOKQ9UQ07 419 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 AP4S1Q9Y587 144 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 CDH10Q9Y6N8 788 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 RAI1Q7Z5J4 1906 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 M0R129 80 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC16A7O60669 478 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 IGHMP01871 453 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 GYPBP06028 91 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 CD3EP07766 207 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 CECR9P0C854 216 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 CD40P25942 277 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC6A6P31641 620 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 CDKN2AP42771 156 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 ACTR3P61158 418 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 DAZAP2Q15038 168 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZSCAN26Q16670 478 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 MEP1BQ16820 701 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 RFX4Q33E94 735 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 VHLLQ6RSH7 139 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 LYPD4Q6UWN0 246 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 CDH24Q86UP0 819 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SKA3Q8IX90 412 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 C1orf162Q8NEQ5 155 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR9Q1Q8NGQ5 310 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR4Q3Q8NH05 313 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 OTULINQ96BN8 352 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 LRR1Q96L50 414 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 TSSK6Q9BXA6 273 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 NUAK2Q9H093 628 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 ESRP2Q9H6T0 727 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 YY1AP1Q9H869 796 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 RPRD1BQ9NQG5 326 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 RNF115Q9Y4L5 304 aa6.32□□□□□ -1.4
DEPDC1B-201ENST00000265036 SONP18583 2426 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 IGHV1-18A0A0C4DH31 117 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC22A23A1A5C7 686 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 FAM221AA4D161 298 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 PRSS37A4D1T9 235 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 FAM183AA6NL82 134 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 RPL36A-HNRNPH2H7BZ11 118 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 MITFO75030 526 aaPredicted RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 MPZL1O95297 269 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 TP53P04637 393 aaPredicted RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 FASP25445 335 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 RPS27P42677 84 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF84P51523 738 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 RPS6KA3P51812 740 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 CDH11P55287 796 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SH3BGRP55822 239 aaPredicted RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 TAF11Q15544 211 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 HIST3H3Q16695 136 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 GSG1Q2KHT4 349 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 NCMAPQ5T1S8 102 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 TMEM236Q5W0B7 351 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 UGT2A3Q6UWM9 527 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 TMEM108Q6UXF1 575 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms