RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 FOXG1P55316 489 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 CXCR4P61073 352 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC35A2P78381 396 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TEKQ02763 1124 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ST3GAL4Q11206 333 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 HIST3H3Q16695 136 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TSPO2Q5TGU0 170 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 C9orf135Q5VTT2 229 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 VWA1Q6PCB0 445 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC25A47Q6Q0C1 308 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ZBTB46Q86UZ6 589 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 GID4Q8IVV7 300 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 CNEP1R1Q8N9A8 125 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 NAXEQ8NCW5 288 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 OR52I1Q8NGK6 324 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 OR2T4Q8NH00 348 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 RFKQ969G6 155 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TMEM45BQ96B21 275 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 WBP1Q96G27 269 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 BBC3Q96PG8 261 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ALKBH3Q96Q83 286 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TBX5Q99593 518 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 COPS4Q9BT78 406 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 CCDC90BQ9GZT6 254 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 DUSP21Q9H596 190 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF696Q9H7X3 374 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 WDR76Q9H967 626 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC7A10Q9NS82 523 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 EMC3Q9P0I2 261 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 PRSS50Q9UI38 385 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 FOXD3Q9UJU5 478 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF835Q9Y2P0 537 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TPRKBQ9Y3C4 175 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 RPL36Q9Y3U8 105 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 COMMD3-BMI1R4GMX3 469 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 KALRNO60229 2985 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 POLEQ07864 2286 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 SMG1Q96Q15 3661 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 A0A1W2PPL8 197 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 MAGEA13PA6NCF6 341 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 CD8B2A6NJW9 211 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 PRRG2O14669 202 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 WDR1O75083 606 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 SEC14L2O76054 403 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 HLA-DQA2P01906 255 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 TFP02787 698 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 MT-ND2P03891 347 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 PRB1P04280 392 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 SMIM18P0DKX4 95 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 FCGR2AP12318 317 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 GABRA1P14867 456 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 ATP6V1B1P15313 513 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 KIR2DL2P43627 348 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 MAP2K4P45985 399 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 PMPCAQ10713 525 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 KCTD21Q4G0X4 260 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 THEM4Q5T1C6 240 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 B3GNT6Q6ZMB0 384 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF100Q8IYN0 542 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 GPR137CQ8N3F9 429 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 RFLNBQ8N5W9 214 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 TSPAN14Q8NG11 270 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 GMPPAQ96IJ6 420 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 SNX18Q96RF0 628 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 RBM24Q9BX46 236 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 YTHDF1Q9BYJ9 559 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 TTTY10Q9BZA0 68 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 SEC61A2Q9H9S3 476 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 ADGRL4Q9HBW9 690 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 MRPL22Q9NWU5 206 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 WARS2Q9UGM6 360 aaKnown RBP8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 CLEC2DQ9UHP7 191 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 RCE1Q9Y256 329 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 UGT2A1Q9Y4X1 527 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 FKBP7Q9Y680 259 aa8.6□□□□□ -1.03
SNRNP40-201ENST00000263694 CFAP46Q8IYW2 2715 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 MBD3L4A6NDZ8 208 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 MBD3L3A6NE82 208 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 TRIM64A6NGJ6 449 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 MBD3L5A6NJ08 208 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC22A31A6NKX4 558 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 ATXN7O15265 892 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 RGS10O43665 173 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 AKAP8O43823 692 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 SS18L1O75177 396 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 KHDRBS3O75525 346 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 CDK1P06493 297 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 GLI4P10075 376 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 CRABP1P29762 137 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 ATP6V1E1P36543 226 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 CD79BP40259 229 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 PER3P56645 1201 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 CSNK2BP67870 215 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 MRPL49Q13405 166 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 GUSBP1Q15486 140 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 CEACAM16Q2WEN9 425 aa8.59□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC35D3Q5M8T2 416 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms