RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 KCNAB1Q14722 419 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 NR0B2Q15466 257 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF676Q8N7Q3 588 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 KREMEN2Q8NCW0 462 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 OR5AP2Q8NGF4 316 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 OR10AC1Q8NH08 325 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ZBTB8AQ96BR9 441 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 NMNAT2Q9BZQ4 307 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 TRIM2Q9C040 744 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 UQCC1Q9NVA1 299 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 MRM2Q9UI43 246 aaKnown RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 PLEKHA6Q9Y2H5 1048 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 YBX2Q9Y2T7 364 aaKnown RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 CHD9Q3L8U1 2897 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 TRIOO75962 3097 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 NARSO43776 548 aaKnown RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 CDC40O60508 579 aaKnown RBP eCLIP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 HLA-AP01891 365 aaKnown RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 CISD3P0C7P0 127 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 TLX1P31314 330 aaPredicted RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 MESP2Q0VG99 397 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 HABP2Q14520 560 aaPredicted RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 PEA15Q15121 130 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 DEFB134Q4QY38 66 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 LINC01590Q5TEZ4 76 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 PRAMEF17Q5VTA0 474 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 LEG1Q6P5S2 330 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 TMEM229BQ8NBD8 167 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 OR51A4Q8NGJ6 313 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 STACQ99469 402 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 TCEAL7Q9BRU2 100 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 PRMT8Q9NR22 394 aaPredicted RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 IKZF2Q9UKS7 526 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 KLHDC2Q9Y2U9 406 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 EMDP50402 254 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 PRKXP51817 358 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 EXOSC7Q15024 291 aaKnown RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 HNRNPA1L2Q32P51 320 aaKnown RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 FHL5Q5TD97 284 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 NDUFAF7Q7L592 441 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 VN1R4Q7Z5H5 301 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 GALNT16Q8N428 558 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 ZSCAN1Q8NBB4 408 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 OR4A4PQ8NGN8 299 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 PHOSPHO1Q8TCT1 267 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 RNF141Q8WVD5 230 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 RBM18Q96H35 190 aaKnown RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 COMMD4Q9H0A8 199 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 SEBOXQ9HB31 216 aaPredicted RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 TMEM100Q9NV29 134 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 DHCR7Q9UBM7 475 aaKnown RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 SNRNP200O75643 2136 aaKnown RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 TRBV5-7A0A0A0MS05 114 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 IGLON5A6NGN9 336 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF729A6NN14 1252 aaPredicted RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 LDB3O75112 727 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 FBXO45P0C2W1 286 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 CBR1P16152 277 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 P2RY2P41231 377 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 ACAA2P42765 397 aaKnown RBP13.59□□□□□ -0.23
XRCC1-201ENST00000262887 SMCO1Q147U7 214 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 DHCR24Q15392 516 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 ARHGAP40Q5TG30 622 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 PIK3IP1Q96FE7 263 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 TOX2Q96NM4 488 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 TSSK2Q96PF2 358 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 GAL3ST1Q99999 423 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 ATG5Q9H1Y0 275 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 MMP26Q9NRE1 261 aa13.59□□□□□ -0.23
XRCC1-201ENST00000262887 EDDM13A0A1B0GTR0 161 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 COLCA2A8K830 154 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 PRRT4C9JH25 899 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 PQBP1O60828 265 aaKnown RBP13.58□□□□□ -0.24
XRCC1-201ENST00000262887 LILRB3O75022 631 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 DNAJB6O75190 326 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 AK1P00568 194 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 TPT1P13693 172 aaKnown RBP13.58□□□□□ -0.24
XRCC1-201ENST00000262887 FOLR2P14207 255 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 PGDP52209 483 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 HYAL4Q2M3T9 481 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 C2orf76Q3KRA6 126 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 TCEAL5Q5H9L2 206 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 SLC39A5Q6ZMH5 540 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 SLC16A9Q7RTY1 509 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 MISPQ8IVT2 679 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 STOML3Q8TAV4 291 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 WFIKKN2Q8TEU8 576 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 ZDHHC12Q96GR4 267 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 ULBP3Q9BZM4 244 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 C4orf47A7E2U8 309 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF705EA8MWA4 302 aaPredicted RBP13.58□□□□□ -0.24
XRCC1-201ENST00000262887 ARPC3O15145 178 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF432O94892 652 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 ITGA5P08648 1049 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 LIPCP11150 499 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 P2RY4P51582 365 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 RUNX2Q13950 521 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 OR7A5Q15622 319 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 SCGB2B2Q4G0G5 96 aa13.58□□□□□ -0.24
XRCC1-201ENST00000262887 ULK3Q6PHR2 472 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms